Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   JVX94_RS08980 Genome accession   NZ_CP070345
Coordinates   1711928..1712125 (-) Length   65 a.a.
NCBI ID   WP_024425054.1    Uniprot ID   A0AAX0Z5U3
Organism   Bacillus sp. PDNC022     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1706928..1717125
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JVX94_RS08955 (JVX94_08955) - 1707300..1708280 (-) 981 WP_205185338.1 ABC transporter ATP-binding protein -
  JVX94_RS08960 (JVX94_08960) - 1708430..1709233 (-) 804 WP_095408191.1 DUF2268 domain-containing protein -
  JVX94_RS08965 (JVX94_08965) fabF 1709311..1710552 (-) 1242 WP_034282078.1 beta-ketoacyl-ACP synthase II -
  JVX94_RS08970 (JVX94_08970) - 1710574..1711512 (-) 939 WP_095408190.1 beta-ketoacyl-ACP synthase III -
  JVX94_RS08975 (JVX94_08975) - 1711684..1711917 (+) 234 WP_144470147.1 hypothetical protein -
  JVX94_RS08980 (JVX94_08980) comZ 1711928..1712125 (-) 198 WP_024425054.1 ComZ family protein Regulator
  JVX94_RS08985 (JVX94_08985) med 1712138..1713100 (-) 963 WP_048238469.1 BMP family ABC transporter substrate-binding protein Regulator
  JVX94_RS08990 (JVX94_08990) - 1713192..1713767 (-) 576 WP_205185340.1 nad binding enzyme -
  JVX94_RS08995 (JVX94_08995) - 1713841..1714581 (-) 741 WP_205185342.1 hypothetical protein -
  JVX94_RS09000 (JVX94_09000) - 1714794..1714988 (+) 195 WP_003211779.1 YjzD family protein -
  JVX94_RS09005 (JVX94_09005) - 1715103..1716368 (-) 1266 WP_144470143.1 MFS transporter -
  JVX94_RS09010 (JVX94_09010) - 1716542..1716721 (-) 180 WP_008348517.1 YjzC family protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7405.45 Da        Isoelectric Point: 4.1652

>NTDB_id=539292 JVX94_RS08980 WP_024425054.1 1711928..1712125(-) (comZ) [Bacillus sp. PDNC022]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLEPEALQPLLTLFTSVMQEAYELGKADAESEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=539292 JVX94_RS08980 WP_024425054.1 1711928..1712125(-) (comZ) [Bacillus sp. PDNC022]
ATGCAGCACGAAAAATCGATGGAATTTTTACAAATTGCCATGAAGTATTTTCCGCAGGCGAAGGAAGAGTTAGATAAAGC
AGGGATTCAGCTTGAGCCTGAAGCACTTCAGCCGCTTCTAACATTATTTACATCTGTCATGCAGGAAGCATACGAGCTTG
GAAAAGCGGATGCAGAATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

72.131

93.846

0.677