Detailed information
Overview
| Name | lytF | Type | Regulator |
| Locus tag | LK450_RS06615 | Genome accession | NZ_CP085939 |
| Coordinates | 1359480..1361414 (+) | Length | 644 a.a. |
| NCBI ID | WP_003032068.1 | Uniprot ID | - |
| Organism | Streptococcus anginosus subsp. anginosus strain FDAARGOS_1569 | ||
| Function | cell lysis (predicted from homology) Cell lysis |
||
Genomic Context
Location: 1354480..1366414
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LK450_RS06585 (LK450_06585) | - | 1354602..1354829 (-) | 228 | WP_003032061.1 | hypothetical protein | - |
| LK450_RS06590 (LK450_06590) | - | 1354839..1355789 (-) | 951 | WP_003032049.1 | ketopantoate reductase family protein | - |
| LK450_RS06595 (LK450_06595) | purK | 1355790..1356881 (-) | 1092 | WP_003032036.1 | 5-(carboxyamino)imidazole ribonucleotide synthase | - |
| LK450_RS06600 (LK450_06600) | purE | 1356868..1357356 (-) | 489 | WP_003032076.1 | 5-(carboxyamino)imidazole ribonucleotide mutase | - |
| LK450_RS06605 (LK450_06605) | - | 1357594..1358028 (-) | 435 | WP_003032062.1 | DUF523 domain-containing protein | - |
| LK450_RS06610 (LK450_06610) | purD | 1358018..1359283 (-) | 1266 | WP_003032080.1 | phosphoribosylamine--glycine ligase | - |
| LK450_RS06615 (LK450_06615) | lytF | 1359480..1361414 (+) | 1935 | WP_003032068.1 | GBS Bsp-like repeat-containing protein | Regulator |
| LK450_RS06620 (LK450_06620) | purH | 1361473..1363020 (-) | 1548 | WP_003032070.1 | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase | - |
| LK450_RS06625 (LK450_06625) | - | 1363035..1363205 (-) | 171 | WP_223349579.1 | phosphoribosylaminoimidazolecarboxamide formyltransferase | - |
| LK450_RS06630 (LK450_06630) | purN | 1363260..1363814 (-) | 555 | WP_003032059.1 | phosphoribosylglycinamide formyltransferase | - |
| LK450_RS06635 (LK450_06635) | purM | 1363814..1364833 (-) | 1020 | WP_003032034.1 | phosphoribosylformylglycinamidine cyclo-ligase | - |
Sequence
Protein
Download Length: 644 a.a. Molecular weight: 71147.85 Da Isoelectric Point: 7.7438
>NTDB_id=539227 LK450_RS06615 WP_003032068.1 1359480..1361414(+) (lytF) [Streptococcus anginosus subsp. anginosus strain FDAARGOS_1569]
MKKYNQLFLLSSAMLSVFSAQLTAQAAETNNTQKSSNPATLASDITVNVSGNTASINYTRLQTQVPYTIYHAVWSDENGQ
DDIKWYSAPQTPTTAVDLRQHTGYGTFHVHTYININGKMVGLNGTTFKVEKPASGTVSTTVLGKTAQISFTRNKDQTNAN
ILHAVWSDEKGQDDIKWYTAGQDTTEIDLSNHKGYGVYHVHTYESKNGKMIGLNGTTFNLEKPNPTIQTSFPEPGIMDIQ
IKNVPETIYKLTVPAWSDRNGQDDLQWYAATKNPDGSYNVRVELKKHNYDTGTYHIHLYGESYVKPEFTGLAGITAQVDA
DKLPSEEEQKPFFSVENINQEQGTYTVKVSETSESKPIQSVRVPIWSTSNQSNIKWYAATNHGDGTFTAAFDIRNHQVLS
GTYTNHIYVKYKDGSEHSYVTDSVAMSAEKIKTKVSVAKRSTYLYEVTVTDAYGDGKISLPTWSEVNGQDDIQWYTATKA
GNGIYKFTVDTQKHTGSGLFHTHVYRNLNGQIIGLTGTSYQVEKPAVSFQPNYAAATTYPKGQCTWGAKALAPWAGNYWG
NGGDWTASARRAGFKTGTTPQVGAIICWTDGGYGHVGVVTHVASNTRIQIQEANYAGKQYIGNFRGWFNPHAAGQGAVSY
IYPK
MKKYNQLFLLSSAMLSVFSAQLTAQAAETNNTQKSSNPATLASDITVNVSGNTASINYTRLQTQVPYTIYHAVWSDENGQ
DDIKWYSAPQTPTTAVDLRQHTGYGTFHVHTYININGKMVGLNGTTFKVEKPASGTVSTTVLGKTAQISFTRNKDQTNAN
ILHAVWSDEKGQDDIKWYTAGQDTTEIDLSNHKGYGVYHVHTYESKNGKMIGLNGTTFNLEKPNPTIQTSFPEPGIMDIQ
IKNVPETIYKLTVPAWSDRNGQDDLQWYAATKNPDGSYNVRVELKKHNYDTGTYHIHLYGESYVKPEFTGLAGITAQVDA
DKLPSEEEQKPFFSVENINQEQGTYTVKVSETSESKPIQSVRVPIWSTSNQSNIKWYAATNHGDGTFTAAFDIRNHQVLS
GTYTNHIYVKYKDGSEHSYVTDSVAMSAEKIKTKVSVAKRSTYLYEVTVTDAYGDGKISLPTWSEVNGQDDIQWYTATKA
GNGIYKFTVDTQKHTGSGLFHTHVYRNLNGQIIGLTGTSYQVEKPAVSFQPNYAAATTYPKGQCTWGAKALAPWAGNYWG
NGGDWTASARRAGFKTGTTPQVGAIICWTDGGYGHVGVVTHVASNTRIQIQEANYAGKQYIGNFRGWFNPHAAGQGAVSY
IYPK
Nucleotide
Download Length: 1935 bp
>NTDB_id=539227 LK450_RS06615 WP_003032068.1 1359480..1361414(+) (lytF) [Streptococcus anginosus subsp. anginosus strain FDAARGOS_1569]
ATGAAAAAATACAATCAATTATTTTTACTATCCAGCGCTATGTTGAGCGTTTTTTCAGCTCAACTAACAGCTCAAGCCGC
GGAAACAAATAATACTCAAAAAAGCTCAAATCCAGCAACTCTCGCTAGCGATATTACTGTCAATGTTTCAGGAAACACTG
CTTCTATTAACTATACACGTTTGCAAACGCAAGTTCCTTACACCATTTACCATGCTGTTTGGTCTGATGAAAATGGGCAA
GATGACATTAAGTGGTATTCCGCGCCCCAAACACCAACTACAGCTGTTGATTTGCGTCAGCACACTGGTTATGGAACCTT
TCACGTCCACACCTATATCAATATCAATGGGAAAATGGTTGGTTTAAACGGAACGACTTTCAAAGTAGAAAAACCAGCTA
GCGGCACGGTTTCTACAACCGTTTTAGGAAAGACTGCTCAAATATCCTTTACTCGAAACAAAGATCAAACAAATGCCAAT
ATTTTACACGCTGTTTGGTCTGACGAAAAAGGACAAGATGATATCAAGTGGTATACAGCAGGGCAAGACACAACAGAAAT
TGACTTATCCAATCATAAAGGATACGGTGTTTACCATGTTCATACTTATGAAAGTAAAAACGGAAAGATGATTGGATTAA
ATGGCACCACTTTTAACCTTGAAAAACCAAATCCTACTATTCAGACTAGCTTTCCTGAGCCTGGTATCATGGATATTCAG
ATCAAAAATGTTCCTGAAACAATCTACAAACTAACTGTTCCGGCTTGGTCTGACCGCAACGGACAGGATGATCTTCAATG
GTATGCAGCTACTAAAAATCCTGATGGAAGCTACAATGTTAGAGTTGAGCTAAAAAAACACAACTATGACACAGGAACTT
ATCACATTCATCTTTACGGAGAAAGCTATGTCAAACCAGAGTTTACTGGCTTAGCTGGAATCACTGCCCAAGTTGATGCT
GATAAATTGCCTTCTGAAGAAGAGCAAAAACCATTCTTCTCTGTTGAAAATATCAATCAAGAACAAGGGACTTATACCGT
CAAAGTTAGTGAAACTTCAGAGTCCAAGCCGATTCAATCCGTCCGAGTACCTATTTGGAGCACGAGCAATCAAAGCAATA
TTAAGTGGTATGCAGCCACTAATCACGGTGACGGAACATTTACGGCAGCATTTGATATTCGCAATCATCAAGTTTTGTCT
GGAACATACACCAATCATATTTATGTGAAATATAAAGACGGTAGCGAGCATAGTTACGTAACGGATTCGGTTGCTATGTC
CGCAGAAAAAATTAAAACCAAAGTATCTGTCGCTAAACGCTCAACTTATCTTTATGAGGTGACGGTGACAGATGCTTACG
GCGATGGCAAGATTAGCCTACCGACTTGGTCTGAAGTCAACGGCCAAGATGATATTCAGTGGTACACCGCTACTAAAGCT
GGAAATGGAATTTACAAATTCACAGTTGATACGCAAAAACACACTGGCAGTGGCCTTTTCCATACACATGTTTACCGCAA
TCTCAACGGTCAAATAATTGGACTAACAGGTACAAGCTATCAGGTAGAGAAGCCTGCTGTCTCTTTCCAACCAAATTATG
CCGCAGCAACGACTTATCCAAAAGGTCAATGCACTTGGGGCGCCAAAGCTCTTGCGCCTTGGGCTGGCAATTATTGGGGC
AACGGTGGTGACTGGACTGCTAGTGCCAGACGAGCTGGTTTTAAAACCGGTACAACTCCACAAGTAGGGGCTATTATTTG
TTGGACAGACGGTGGTTACGGTCACGTTGGAGTTGTTACTCACGTTGCCTCAAACACACGCATTCAGATTCAAGAGGCCA
ACTACGCTGGAAAACAGTATATTGGCAACTTCCGCGGCTGGTTCAATCCTCATGCAGCTGGACAAGGAGCAGTTAGTTAC
ATTTATCCAAAATAA
ATGAAAAAATACAATCAATTATTTTTACTATCCAGCGCTATGTTGAGCGTTTTTTCAGCTCAACTAACAGCTCAAGCCGC
GGAAACAAATAATACTCAAAAAAGCTCAAATCCAGCAACTCTCGCTAGCGATATTACTGTCAATGTTTCAGGAAACACTG
CTTCTATTAACTATACACGTTTGCAAACGCAAGTTCCTTACACCATTTACCATGCTGTTTGGTCTGATGAAAATGGGCAA
GATGACATTAAGTGGTATTCCGCGCCCCAAACACCAACTACAGCTGTTGATTTGCGTCAGCACACTGGTTATGGAACCTT
TCACGTCCACACCTATATCAATATCAATGGGAAAATGGTTGGTTTAAACGGAACGACTTTCAAAGTAGAAAAACCAGCTA
GCGGCACGGTTTCTACAACCGTTTTAGGAAAGACTGCTCAAATATCCTTTACTCGAAACAAAGATCAAACAAATGCCAAT
ATTTTACACGCTGTTTGGTCTGACGAAAAAGGACAAGATGATATCAAGTGGTATACAGCAGGGCAAGACACAACAGAAAT
TGACTTATCCAATCATAAAGGATACGGTGTTTACCATGTTCATACTTATGAAAGTAAAAACGGAAAGATGATTGGATTAA
ATGGCACCACTTTTAACCTTGAAAAACCAAATCCTACTATTCAGACTAGCTTTCCTGAGCCTGGTATCATGGATATTCAG
ATCAAAAATGTTCCTGAAACAATCTACAAACTAACTGTTCCGGCTTGGTCTGACCGCAACGGACAGGATGATCTTCAATG
GTATGCAGCTACTAAAAATCCTGATGGAAGCTACAATGTTAGAGTTGAGCTAAAAAAACACAACTATGACACAGGAACTT
ATCACATTCATCTTTACGGAGAAAGCTATGTCAAACCAGAGTTTACTGGCTTAGCTGGAATCACTGCCCAAGTTGATGCT
GATAAATTGCCTTCTGAAGAAGAGCAAAAACCATTCTTCTCTGTTGAAAATATCAATCAAGAACAAGGGACTTATACCGT
CAAAGTTAGTGAAACTTCAGAGTCCAAGCCGATTCAATCCGTCCGAGTACCTATTTGGAGCACGAGCAATCAAAGCAATA
TTAAGTGGTATGCAGCCACTAATCACGGTGACGGAACATTTACGGCAGCATTTGATATTCGCAATCATCAAGTTTTGTCT
GGAACATACACCAATCATATTTATGTGAAATATAAAGACGGTAGCGAGCATAGTTACGTAACGGATTCGGTTGCTATGTC
CGCAGAAAAAATTAAAACCAAAGTATCTGTCGCTAAACGCTCAACTTATCTTTATGAGGTGACGGTGACAGATGCTTACG
GCGATGGCAAGATTAGCCTACCGACTTGGTCTGAAGTCAACGGCCAAGATGATATTCAGTGGTACACCGCTACTAAAGCT
GGAAATGGAATTTACAAATTCACAGTTGATACGCAAAAACACACTGGCAGTGGCCTTTTCCATACACATGTTTACCGCAA
TCTCAACGGTCAAATAATTGGACTAACAGGTACAAGCTATCAGGTAGAGAAGCCTGCTGTCTCTTTCCAACCAAATTATG
CCGCAGCAACGACTTATCCAAAAGGTCAATGCACTTGGGGCGCCAAAGCTCTTGCGCCTTGGGCTGGCAATTATTGGGGC
AACGGTGGTGACTGGACTGCTAGTGCCAGACGAGCTGGTTTTAAAACCGGTACAACTCCACAAGTAGGGGCTATTATTTG
TTGGACAGACGGTGGTTACGGTCACGTTGGAGTTGTTACTCACGTTGCCTCAAACACACGCATTCAGATTCAAGAGGCCA
ACTACGCTGGAAAACAGTATATTGGCAACTTCCGCGGCTGGTTCAATCCTCATGCAGCTGGACAAGGAGCAGTTAGTTAC
ATTTATCCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lytF | Streptococcus gordonii strain NCTC7865 |
45.977 |
81.056 |
0.373 |
| lytF | Streptococcus gordonii str. Challis substr. CH1 |
44.961 |
80.124 |
0.36 |