Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | JQN76_RS11480 | Genome accession | NZ_CP070305 |
| Coordinates | 2360377..2360676 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus sp. SM3655 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2355377..2365676
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JQN76_RS11455 (JQN76_11455) | gcvPA | 2356589..2357935 (-) | 1347 | WP_000019691.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| JQN76_RS11460 (JQN76_11460) | gcvT | 2357955..2359046 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| JQN76_RS11465 (JQN76_11465) | - | 2359205..2359729 (-) | 525 | WP_001015121.1 | shikimate kinase | - |
| JQN76_RS11470 (JQN76_11470) | - | 2359719..2359865 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| JQN76_RS11475 (JQN76_11475) | comGF | 2359962..2360459 (-) | 498 | WP_029694050.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| JQN76_RS11480 (JQN76_11480) | comGE | 2360377..2360676 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| JQN76_RS11485 (JQN76_11485) | comGD | 2360663..2361109 (-) | 447 | WP_072433556.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| JQN76_RS11490 (JQN76_11490) | comGC | 2361087..2361398 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| JQN76_RS11495 (JQN76_11495) | comGB | 2361412..2362482 (-) | 1071 | WP_000776421.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| JQN76_RS11500 (JQN76_11500) | comGA | 2362454..2363428 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| JQN76_RS11505 (JQN76_11505) | - | 2363480..2364103 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| JQN76_RS11510 (JQN76_11510) | - | 2364100..2364429 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| JQN76_RS11515 (JQN76_11515) | - | 2364429..2365415 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| JQN76_RS11520 (JQN76_11520) | - | 2365412..2365615 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=539108 JQN76_RS11480 WP_000844413.1 2360377..2360676(-) (comGE) [Staphylococcus sp. SM3655]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=539108 JQN76_RS11480 WP_000844413.1 2360377..2360676(-) (comGE) [Staphylococcus sp. SM3655]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |