Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   LLUL021_RS09555 Genome accession   NZ_CP070263
Coordinates   1912175..1912876 (-) Length   233 a.a.
NCBI ID   WP_137015969.1    Uniprot ID   -
Organism   Lactococcus lactis subsp. lactis strain UL021     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 1907175..1917876
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LLUL021_RS09535 (LLUL021_09510) - 1907285..1908502 (-) 1218 WP_004255189.1 cysteine desulfurase -
  LLUL021_RS09540 (LLUL021_09515) sufD 1908502..1909761 (-) 1260 WP_370566514.1 Fe-S cluster assembly protein SufD -
  LLUL021_RS09545 (LLUL021_09520) sufC 1909896..1910666 (-) 771 WP_004255181.1 Fe-S cluster assembly ATPase SufC -
  LLUL021_RS09550 (LLUL021_09525) - 1910841..1912172 (-) 1332 WP_004255177.1 MraY family glycosyltransferase -
  LLUL021_RS09555 (LLUL021_09530) mecA 1912175..1912876 (-) 702 WP_137015969.1 adaptor protein MecA Regulator
  LLUL021_RS09560 (LLUL021_09535) - 1913006..1913740 (-) 735 WP_004255171.1 amino acid ABC transporter ATP-binding protein -
  LLUL021_RS09565 (LLUL021_09540) - 1913740..1914426 (-) 687 WP_004255158.1 amino acid ABC transporter permease -
  LLUL021_RS09570 (LLUL021_09545) - 1914574..1915482 (-) 909 WP_003130548.1 diacylglycerol kinase family protein -

Sequence

Protein


Download         Length: 233 a.a.        Molecular weight: 27093.46 Da        Isoelectric Point: 4.1246

>NTDB_id=538894 LLUL021_RS09555 WP_137015969.1 1912175..1912876(-) (mecA) [Lactococcus lactis subsp. lactis strain UL021]
MKYEDINENTIKITLSFDDLTDYDIKLSDFFGNQEVIEQFFYELVDELGLENRFGNVGMLTFQIQPFPQGVHMIVHEESM
LGEGGEIPDDPEEFEELMTGFYNKLNEIGADMARERGITDFKPGLGLPGTKKDEAEQEPDFIYYSIRYEDIMSVLTGIKN
VKFADEESEFYRYDGNFYLVVLDNQKEKGKMHVESTRSRMMEYGEATKMSREFLQEYGECLIATRALDVLRKI

Nucleotide


Download         Length: 702 bp        

>NTDB_id=538894 LLUL021_RS09555 WP_137015969.1 1912175..1912876(-) (mecA) [Lactococcus lactis subsp. lactis strain UL021]
ATGAAATATGAGGATATAAACGAAAATACTATAAAAATCACCTTGTCTTTTGATGATTTGACAGATTATGATATCAAATT
ATCAGACTTTTTCGGAAATCAAGAAGTCATTGAACAATTTTTCTATGAATTGGTTGATGAGCTTGGTTTAGAAAATCGCT
TTGGAAATGTGGGAATGTTAACTTTCCAAATCCAACCTTTTCCTCAAGGTGTTCATATGATTGTTCATGAAGAATCGATG
CTAGGTGAAGGTGGAGAAATTCCAGATGACCCAGAAGAGTTTGAAGAATTGATGACTGGTTTTTATAATAAATTAAATGA
AATAGGGGCAGATATGGCGCGCGAGCGAGGAATTACTGATTTTAAACCTGGGCTTGGTTTACCAGGAACAAAAAAAGACG
AAGCTGAACAAGAGCCAGATTTTATTTATTACTCTATTCGTTATGAAGATATTATGTCTGTCTTAACAGGAATAAAAAAT
GTGAAGTTTGCTGATGAAGAATCAGAGTTTTATCGTTATGATGGCAATTTTTATCTTGTTGTTTTGGATAATCAAAAAGA
AAAAGGCAAGATGCATGTCGAAAGTACCCGTTCACGAATGATGGAATATGGGGAAGCAACAAAAATGAGTCGAGAATTTT
TGCAGGAGTATGGTGAATGTCTTATCGCGACACGTGCTTTAGATGTTCTTAGAAAAATCTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-230)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Lactococcus lactis subsp. lactis strain DGCC12653

99.142

100

0.991
  mecA Lactococcus lactis subsp. cremoris KW2

96.567

100

0.966