Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | M3Q_RS18240 | Genome accession | NC_018706 |
| Coordinates | 3841407..3841889 (-) | Length | 160 a.a. |
| NCBI ID | WP_001046420.1 | Uniprot ID | A0A7U3Y2Y6 |
| Organism | Acinetobacter baumannii TYTH-1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3836407..3846889
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M3Q_RS18205 (M3Q_3587) | - | 3836513..3837547 (+) | 1035 | WP_001189447.1 | lipase secretion chaperone | - |
| M3Q_RS18210 (M3Q_3588) | - | 3837662..3838603 (+) | 942 | WP_085916958.1 | triacylglycerol lipase | - |
| M3Q_RS18215 (M3Q_3589) | rplS | 3838656..3839024 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| M3Q_RS18220 (M3Q_3590) | trmD | 3839233..3839973 (-) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| M3Q_RS18225 (M3Q_3591) | rimM | 3840019..3840567 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| M3Q_RS18230 (M3Q_3592) | rpsP | 3840587..3840838 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| M3Q_RS18235 (M3Q_3593) | pilE | 3840985..3841410 (-) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| M3Q_RS18240 (M3Q_3594) | pilY2 | 3841407..3841889 (-) | 483 | WP_001046420.1 | type IV pilin protein | Machinery gene |
| M3Q_RS18245 (M3Q_3595) | pilY1 | 3841902..3845756 (-) | 3855 | WP_000768970.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| M3Q_RS18250 (M3Q_3596) | pilX | 3845768..3846586 (-) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17548.77 Da Isoelectric Point: 8.4817
>NTDB_id=53870 M3Q_RS18240 WP_001046420.1 3841407..3841889(-) (pilY2) [Acinetobacter baumannii TYTH-1]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSASNGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSASNGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=53870 M3Q_RS18240 WP_001046420.1 3841407..3841889(-) (pilY2) [Acinetobacter baumannii TYTH-1]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTTCTAATGGTCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTTCTAATGGTCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
97.5 |
100 |
0.975 |
| comE | Acinetobacter baylyi ADP1 |
40.116 |
100 |
0.431 |