Detailed information NTG0538034

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: LJA36_RS01840
• Genome accession: NZ_CP085282
• Coordinates: 492032..493054 (-)
• Length: 340 a.a.
• NCBI ID: WP_007409697.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain TPS17
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 487032..498054

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LJA36_RS01810	-	487538..488419 (-)	882	WP_039251565.1	2-dehydropantoate 2-reductase	-
LJA36_RS01815	-	488582..489064 (+)	483	WP_007409700.1	N-acetyltransferase	-
LJA36_RS01820	gerR	489105..489680 (-)	576	WP_003154450.1	sporulation-specific transcriptional regulator GerR	-
LJA36_RS01825	rpmF	489838..490017 (-)	180	WP_003154457.1	50S ribosomal protein L32	-
LJA36_RS01830	-	490039..490557 (-)	519	WP_007409699.1	DUF177 domain-containing protein	-
LJA36_RS01835	-	490766..492013 (+)	1248	WP_015417417.1	nucleotidyltransferase	-
LJA36_RS01840	sepM	492032..493054 (-)	1023	WP_007409697.1	SepM family pheromone-processing serine protease	Regulator
LJA36_RS01845	-	493060..493839 (-)	780	WP_007409696.1	patatin family protein	-
LJA36_RS01850	ylbJ	494019..495245 (+)	1227	WP_040238175.1	sporulation integral membrane protein YlbJ	-
LJA36_RS01855	coaD	495264..495746 (-)	483	WP_007409694.1	pantetheine-phosphate adenylyltransferase	-
LJA36_RS01860	rsmD	495751..496305 (-)	555	WP_007409693.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
LJA36_RS01865	-	496604..496876 (-)	273	WP_003154470.1	YlbG family protein	-
LJA36_RS01870	ylbF	496935..497384 (-)	450	WP_003154472.1	YlbF family regulator	Regulator
LJA36_RS01875	-	497455..497694 (-)	240	WP_003154475.1	YlbE-like family protein	-

Sequence

Protein

• Length: 340 a.a.
• Molecular weight: 37448.99 Da
• Isoelectric Point: 7.3837

>NTDB_id=538034 LJA36_RS01840 WP_007409697.1 492032..493054(-) (sepM) [Bacillus amyloliquefaciens strain TPS17]
MKAKHFRWVFIILILLIAVTFIKLPYYITQPGEASELRPLIKVDGGYPEKGSLSLMTVKVGPANPYTYLWAKVHPYEEIV
PDESIKEEGESDSDYMKRQLQMMKSSQENAVIAAYQKAGKQVKYSFNGIYASSVVSDMPAKGKIEVGDKIISADGKTYES
AEKLIDYISSKKAGEKVTFHIERDTKEKTVDIVLKSFPDDPKRAGIGVALYTDRNVKVKPDLHFSIENIGGPSAGLMMSL
EIYNQLTKPDETKGYNIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGAENSDYKNAVKTAKAIKSDMKIV
PVDTMQDALDYLDQLKVKST

Nucleotide

• Length: 1023 bp

>NTDB_id=538034 LJA36_RS01840 WP_007409697.1 492032..493054(-) (sepM) [Bacillus amyloliquefaciens strain TPS17]
ATGAAAGCAAAACATTTTCGCTGGGTGTTTATCATCCTGATCTTATTAATCGCTGTTACATTTATTAAGCTTCCGTATTA
CATCACACAGCCGGGAGAAGCATCAGAGCTGAGACCGCTGATTAAGGTGGACGGAGGCTATCCTGAAAAAGGAAGCCTTT
CCTTGATGACTGTCAAAGTAGGCCCCGCCAATCCGTATACATATCTTTGGGCGAAAGTGCATCCTTACGAAGAAATCGTC
CCTGATGAAAGCATAAAAGAAGAGGGCGAATCGGACTCGGATTATATGAAGCGCCAGCTGCAAATGATGAAAAGCTCCCA
AGAAAACGCGGTCATTGCCGCTTATCAAAAAGCCGGGAAACAGGTAAAATACTCATTTAACGGCATTTATGCCAGTTCAG
TCGTCTCTGACATGCCGGCAAAAGGAAAAATAGAGGTCGGTGATAAAATTATCAGCGCGGACGGGAAAACATACGAATCC
GCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGGGAAAAAGTAACGTTTCACATTGAACGGGACACGAAAGA
AAAGACCGTTGACATTGTGCTGAAATCATTCCCGGACGACCCGAAAAGAGCGGGAATCGGTGTCGCATTATATACGGACC
GGAACGTGAAAGTGAAGCCGGATCTTCATTTCAGCATTGAAAACATCGGCGGGCCTTCTGCGGGTCTCATGATGTCTTTA
GAAATTTATAACCAGCTGACAAAACCTGACGAAACAAAAGGCTATAATATAGCCGGGACGGGGACAATCGACGTGGACGG
CAAAGTCGGACCGATCGGCGGAATCGATCAGAAAGTCGTCGCCGCAGACAAAGCGGGAAAAGATATTTTCTTTGCGCCGA
ATCAAAACGGAGCTGAAAATTCTGATTACAAAAATGCGGTAAAAACGGCGAAAGCAATCAAGTCCGATATGAAGATCGTC
CCTGTCGACACCATGCAGGACGCACTTGACTATTTGGATCAGCTGAAAGTAAAAAGCACCTGA

Domains

Predicted by InterProScan.

• PDZ domain (PDZ_2) (127-193)

• Peptidase family M50 (Peptidase_M50) (99-218)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (230-330)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	38.953	100	0.394