Detailed information NTG0053763

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: SMSK321_RS10580
• Genome accession: NZ_AEDT01000032
• Coordinates: 221358..222455 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266678.1
• Uniprot ID: A0ABN6KRE7
• Organism: Streptococcus mitis SK321
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 216358..227455

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SMSK321_RS10560 (SMSK321_1623)	pgsA	216873..217418 (-)	546	WP_000712128.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
SMSK321_RS10565 (SMSK321_1624)	rodZ	217429..218256 (-)	828	WP_001227986.1	cytoskeleton protein RodZ	-
SMSK321_RS0102880	yfmH	218298..219581 (-)	1284	WP_000170205.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
SMSK321_RS10570 (SMSK321_1625)	yfmF	219578..220828 (-)	1251	WP_000424254.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
SMSK321_RS10575 (SMSK321_1626)	yaaA	220987..221355 (+)	369	WP_000455894.1	S4 domain-containing protein YaaA	-
SMSK321_RS10580 (SMSK321_1627)	recF	221358..222455 (+)	1098	WP_000266678.1	DNA replication/repair protein RecF	Machinery gene
SMSK321_RS10585 (SMSK321_1628)	guaB	222505..223983 (-)	1479	WP_000073435.1	IMP dehydrogenase	-
SMSK321_RS10590 (SMSK321_1629)	trpS	224135..225160 (-)	1026	WP_000594923.1	tryptophan--tRNA ligase	-
SMSK321_RS10595 (SMSK321_1630)	-	225366..226988 (+)	1623	WP_000958782.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 42026.06 Da
• Isoelectric Point: 7.6897

>NTDB_id=53763 SMSK321_RS10580 WP_000266678.1 221358..222455(+) (recF) [Streptococcus mitis SK321]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKQTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSVRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLIDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKEDLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISHSIQTFITTTSLDHLQNLPENLSIFTIQDGKVSVNQN

Nucleotide

• Length: 1098 bp

>NTDB_id=53763 SMSK321_RS10580 WP_000266678.1 221358..222455(+) (recF) [Streptococcus mitis SK321]
ATGTGGCTACAACACCTATCTCTCAAGACTTTTCGTAACTATAAAGAGACGAAAATAGACTTTAATCCTAAATTAAATGT
CTTTTTAGGACGCAATGCGCAAGGTAAAACAAATATGTTAGAGGCTATCTATTTTTTAGCCTTAACACGTAGTCATCGGA
CTCGGACAGATAAAAATCTTATTCATTTTGACGAGGAACAACTTCATCTTTCAGGTCTTGTTCAGAAACAAACGGGATCC
ATTCCTCTCGAAATCGAACTAACACAAAAAGGGCGTGTGACAAAAGTTAATCACTTAAAACAGGCACGACTTTCAGATTA
CGTAGGACACATGAATGTTGTCTTATTTGCTCCGGAAGATTTACAACTAATTAAAGGAGCACCTTCAGTTCGACGAAAAT
TCATTGATATGGAGCTTGGACAAATTAAGCCCATCTATCTATCAGATTTAACCAATTATAACCATATCCTTAAGCAAAGA
AATACCTATCTAAAATCAGCTCAAAAAATAGATGAAACCTTCCTTTCAGTTTTAGATGATCAGCTAATTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGTCGTAAGAAACATTTTGAACTCTCTAATC
AGATTGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAAGAAGACTTATCAGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGGTCCAGAGATTTATTTAAAAAGAACACTGGTGTTGGTCCTCATCGGGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGTCAAGGCCAACATCGTAGTCTCGTCCTTTCTATAAAATTAGCAGAAATCG
AGTTAATGGAAAGTATTACTACAGAATCTCCGATATTATTGCTTGACGATGTCATGAGTGAACTTGACAACACTAGACAA
CTAAAATTATTAGAAACGATTTCTCACTCAATCCAAACCTTTATTACAACAACAAGCTTAGATCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTTACTATTCAGGATGGTAAAGTTTCTGTAAATCAAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	97.808	100	0.978
recF	Bacillus subtilis subsp. subtilis str. 168	46.196	100	0.466