Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | I6K94_RS09470 | Genome accession | NZ_CP069954 |
| Coordinates | 2029498..2029893 (+) | Length | 131 a.a. |
| NCBI ID | WP_002457121.1 | Uniprot ID | A0A7H5C5S7 |
| Organism | Staphylococcus epidermidis strain FDAARGOS_1364 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2024498..2034893
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6K94_RS09445 (I6K94_09445) | - | 2025917..2026321 (+) | 405 | WP_002447782.1 | F0F1 ATP synthase subunit epsilon | - |
| I6K94_RS09450 (I6K94_09450) | - | 2026470..2026703 (+) | 234 | WP_002456242.1 | DUF1146 family protein | - |
| I6K94_RS09455 (I6K94_09455) | murA | 2026813..2028078 (+) | 1266 | WP_001829978.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| I6K94_RS09460 (I6K94_09460) | fabZ | 2028112..2028549 (+) | 438 | WP_001829953.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| I6K94_RS09465 (I6K94_09465) | - | 2028867..2029307 (-) | 441 | WP_001829935.1 | YwpF-like family protein | - |
| I6K94_RS09470 (I6K94_09470) | ssb | 2029498..2029893 (+) | 396 | WP_002457121.1 | single-stranded DNA-binding protein | Machinery gene |
| I6K94_RS09475 (I6K94_09475) | - | 2030281..2030940 (+) | 660 | WP_001829904.1 | transglycosylase family protein | - |
| I6K94_RS09480 (I6K94_09480) | tenA | 2031224..2031913 (+) | 690 | WP_001829894.1 | thiaminase II | - |
| I6K94_RS09485 (I6K94_09485) | thiD | 2031906..2032727 (+) | 822 | WP_001832736.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| I6K94_RS09490 (I6K94_09490) | thiM | 2032720..2033508 (+) | 789 | WP_001829971.1 | hydroxyethylthiazole kinase | - |
| I6K94_RS09495 (I6K94_09495) | thiE | 2033514..2034152 (+) | 639 | WP_002505076.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15159.02 Da Isoelectric Point: 5.2661
>NTDB_id=537568 I6K94_RS09470 WP_002457121.1 2029498..2029893(+) (ssb) [Staphylococcus epidermidis strain FDAARGOS_1364]
MLNKIVIVGRMTKDAQIYEKEDNKIATFCVATERNYKDDNNEISTDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKNKNNETPSDNQFENNTYQPDDLEIIHI
MLNKIVIVGRMTKDAQIYEKEDNKIATFCVATERNYKDDNNEISTDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKNKNNETPSDNQFENNTYQPDDLEIIHI
Nucleotide
Download Length: 396 bp
>NTDB_id=537568 I6K94_RS09470 WP_002457121.1 2029498..2029893(+) (ssb) [Staphylococcus epidermidis strain FDAARGOS_1364]
ATGTTAAATAAAATAGTCATTGTTGGTAGAATGACGAAAGATGCTCAAATCTATGAAAAGGAGGATAACAAAATAGCAAC
ATTTTGCGTTGCTACAGAAAGAAACTACAAAGATGATAATAATGAAATTTCTACAGATTATTTACTTTGTAAAGCTTTCG
GTAAAACTGCCACTAATATTGAAAAGTACACTAGTCAAGGTACTTTAGTAGGTATAACTGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGCCAAACACATTTTGTTACAGAATTATACGTTGAAACAATAAAATTCATGTCCCCAAAAAATAAAAA
CAATGAAACTCCCTCTGATAATCAATTTGAAAACAACACTTATCAACCTGATGATTTAGAAATAATTCATATTTAA
ATGTTAAATAAAATAGTCATTGTTGGTAGAATGACGAAAGATGCTCAAATCTATGAAAAGGAGGATAACAAAATAGCAAC
ATTTTGCGTTGCTACAGAAAGAAACTACAAAGATGATAATAATGAAATTTCTACAGATTATTTACTTTGTAAAGCTTTCG
GTAAAACTGCCACTAATATTGAAAAGTACACTAGTCAAGGTACTTTAGTAGGTATAACTGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGCCAAACACATTTTGTTACAGAATTATACGTTGAAACAATAAAATTCATGTCCCCAAAAAATAAAAA
CAATGAAACTCCCTCTGATAATCAATTTGAAAACAACACTTATCAACCTGATGATTTAGAAATAATTCATATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
74.046 |
100 |
0.74 |
| ssb | Staphylococcus aureus MW2 |
73.282 |
100 |
0.733 |