Detailed information NTG0537306

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: LIO32_RS05280
• Genome accession: NZ_CP085087
• Coordinates: 1047765..1048835 (+)
• Length: 356 a.a.
• NCBI ID: WP_024405698.1
• Uniprot ID: -
• Organism: Streptococcus suis strain Ssuis_MA2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1042765..1053835

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LIO32_RS05250	-	1043480..1043812 (+)	333	WP_002935001.1	putative DNA-binding protein	-
LIO32_RS05255	ffh	1043825..1045399 (+)	1575	WP_024405702.1	signal recognition particle protein	-
LIO32_RS05260	-	1045593..1046261 (+)	669	WP_074389422.1	SatD family protein	-
LIO32_RS05265	-	1046265..1047005 (+)	741	WP_074389423.1	DUF3307 domain-containing protein	-
LIO32_RS05270	-	1047072..1047365 (+)	294	WP_226319149.1	adenylyl-sulfate kinase	-
LIO32_RS05275	-	1047362..1047598 (+)	237	WP_226319150.1	hypothetical protein	-
LIO32_RS05280	xerS	1047765..1048835 (+)	1071	WP_024405698.1	tyrosine recombinase XerS	Machinery gene
LIO32_RS05285	-	1048905..1050413 (-)	1509	WP_024405697.1	phosphoglucomutase	-
LIO32_RS05290	-	1050488..1051429 (-)	942	WP_024405696.1	sensor histidine kinase	-
LIO32_RS05295	braR	1051426..1052091 (-)	666	WP_024405695.1	response regulator transcription factor	Regulator
LIO32_RS05300	-	1052133..1052399 (-)	267	WP_024405694.1	type II toxin-antitoxin system RelE/ParE family toxin	-
LIO32_RS05305	relB	1052383..1052634 (-)	252	WP_012775104.1	type II toxin-antitoxin system RelB family antitoxin	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41586.85 Da
• Isoelectric Point: 9.4657

>NTDB_id=537306 LIO32_RS05280 WP_024405698.1 1047765..1048835(+) (xerS) [Streptococcus suis strain Ssuis_MA2]
MRRELLLEKIDQLKEIMPWFVLEYYQSKLAVPYSFTTLYEYLKEYRRFFEWLQDSDLVSVERIADIPLDILEHVTKKDME
AFILYLRERPLLNANTTQNGVSQTTINRTLSALSSLFKYLTEEVENEQGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
LFLGDETMEFLDYVDKEYQVKLSKRALSSFQKNKERDLAILALLLASGVRLSEAVNLDLRDVNLKMMIIEVTRKGGKRDS
VNVAGFAKPYLEAYMNIRQQRYKAEKTDTAFFLSEYRGLPNRIDASSIEKMVAKYSADFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHANTQVTDLYTHIVNDEQKNALDQL

Nucleotide

• Length: 1071 bp

>NTDB_id=537306 LIO32_RS05280 WP_024405698.1 1047765..1048835(+) (xerS) [Streptococcus suis strain Ssuis_MA2]
ATGAGACGCGAGTTATTACTAGAAAAAATTGATCAACTAAAAGAAATTATGCCTTGGTTTGTTCTGGAATATTATCAGTC
AAAATTGGCTGTGCCTTACAGTTTTACAACCTTGTACGAATATCTAAAGGAATACCGTAGATTCTTTGAGTGGTTACAGG
ATTCGGATTTGGTATCTGTGGAACGGATTGCTGACATTCCTTTGGATATTCTGGAACATGTGACAAAAAAAGATATGGAA
GCCTTTATTCTTTATCTGCGGGAGCGTCCCTTGCTGAACGCCAATACCACGCAGAATGGTGTGTCGCAGACCACTATTAA
CCGTACCCTGTCGGCTCTTTCTAGTCTCTTCAAGTATTTAACCGAAGAAGTGGAAAATGAGCAGGGGGAGCCCTACTTCT
ACCGCAATGTCATGAAGAAGGTATCCACCAAGAAGAAGAAGGAAACCTTGGCAGCGCGGGCGGAGAATATCAAGCAAAAG
CTCTTTTTGGGCGATGAAACCATGGAATTCTTGGACTATGTCGATAAAGAATACCAGGTAAAGTTATCCAAACGTGCCCT
CTCATCCTTCCAGAAAAATAAGGAGCGGGATTTGGCGATTCTGGCACTTCTCTTGGCGTCTGGCGTTCGTCTGTCTGAGG
CGGTCAATCTGGACCTCCGTGATGTCAACCTCAAGATGATGATCATCGAGGTGACCCGTAAAGGTGGCAAGCGGGACTCG
GTCAATGTGGCAGGATTTGCTAAGCCTTACCTAGAAGCCTACATGAATATCCGGCAGCAACGCTACAAGGCTGAAAAAAC
GGATACAGCCTTCTTCCTGTCCGAATACCGTGGTCTACCCAATCGTATCGACGCTTCTTCCATTGAGAAAATGGTGGCTA
AGTACTCTGCGGACTTCAAGATACGCGTAACTCCCCACAAACTCCGTCATACCTTGGCAACTCGGCTCTACGACGCCACT
AAGTCACAAGTTCTGGTCAGTCACCAACTGGGTCATGCCAATACCCAAGTCACAGACCTCTATACCCATATCGTCAACGA
TGAGCAAAAAAATGCTCTGGATCAATTATAG

Domains

Predicted by InterProScan.

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

• Phage integrase family (Phage_integrase) (190-344)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	83.146	100	0.831