Detailed information NTG0537281

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: I6K87_RS08360
• Genome accession: NZ_CP069892
• Coordinates: 1679628..1682057 (+)
• Length: 809 a.a.
• NCBI ID: WP_204982545.1
• Uniprot ID: -
• Organism: Streptococcus anginosus strain FDAARGOS_1357
• Function: degradation of ComW (predicted from homology) Competence regulation

Genomic Context

Location: 1674628..1687057

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6K87_RS08330 (I6K87_08330)	rplQ	1675048..1675434 (+)	387	WP_003026513.1	50S ribosomal protein L17	-
I6K87_RS08335 (I6K87_08335)	comR/comR2	1675852..1676325 (+)	474	WP_049517056.1	sigma-70 family RNA polymerase sigma factor	Regulator
I6K87_RS08340 (I6K87_08340)	rpsB	1676558..1677340 (+)	783	WP_003026510.1	30S ribosomal protein S2	-
I6K87_RS08345 (I6K87_08345)	tsf	1677423..1678466 (+)	1044	WP_204982543.1	translation elongation factor Ts	-
I6K87_RS08350 (I6K87_08350)	-	1678553..1678903 (-)	351	WP_204982544.1	hypothetical protein	-
I6K87_RS08355 (I6K87_08355)	-	1679163..1679624 (+)	462	WP_049533054.1	CtsR family transcriptional regulator	-
I6K87_RS08360 (I6K87_08360)	clpC	1679628..1682057 (+)	2430	WP_204982545.1	ATP-dependent Clp protease ATP-binding subunit	Regulator
I6K87_RS08365 (I6K87_08365)	-	1682100..1682543 (+)	444	WP_204982546.1	GNAT family N-acetyltransferase	-
I6K87_RS08370 (I6K87_08370)	dusB	1682618..1683589 (-)	972	WP_204982547.1	tRNA dihydrouridine synthase DusB	-
I6K87_RS08375 (I6K87_08375)	hslO	1683576..1684448 (-)	873	WP_338092810.1	Hsp33 family molecular chaperone HslO	-
I6K87_RS08380 (I6K87_08380)	-	1684669..1685940 (-)	1272	WP_049533051.1	toxic anion resistance protein	-
I6K87_RS08385 (I6K87_08385)	-	1685958..1686776 (-)	819	WP_003041789.1	hypothetical protein	-

Sequence

Protein

• Length: 809 a.a.
• Molecular weight: 90123.38 Da
• Isoelectric Point: 6.3033

>NTDB_id=537281 I6K87_RS08360 WP_204982545.1 1679628..1682057(+) (clpC) [Streptococcus anginosus strain FDAARGOS_1357]
MKYSKALTESIESAQLLASHFETDYLESWHLLIAMANNPYSVAGSVLNDYPLEIDDFEKAAFHITGKIYQQEGSFTIWPF
SHRMKVLFLTAERIAEAVHAKNLGTEHVLLAMLFDRGSLAARLLEFTGFSYEDKEGVLRMTDLRKNLEHKASWNKEDLKA
IRHLNKNAAATRQTMANMMGMPPATSGGLEDYTRDLTEMAHTGLLEPVIGRDKEISRMLQILSRKTKNNPVLVGDAGVGK
TALALGLAQRVAAGQVPNELAKMRVLELDLMNVVAGTRFRGDFEERMNNIINDIEADRHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKYIEKDAALSRRFAKITIEEPTVADSIAILQGLKKSYEEHHKVVITDSAIET
AVKYAHRYLTNKHLPDSAIDLLDEAAATVQNKGPQNHVKTELSAADEALMAGDWKKVGTLLEKESQPIVYKLKVKDEDIL
ATLSGLSGIPVQKLTQTDAKKYLNLEKELHKRVIGQNEAISAISRAIRRNQSGIRTSKRPIGSFMFLGPTGVGKTELAKA
LAEVLFDDETALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKVDFSNTIIIMTSNLGATSLRDDKTVGFGARDVHFDHESMEKRMMEELKKSYRPEFINRIDEKVVFHSLTSE
DMQEVVKIMVKPLIVSLAEKGIKLKFQPSALKLLAQEGYDPEMGARPLRRTLQTQVEDHLSELLLAGELQMGQSLKVGVK
AGQLEFEVL

Nucleotide

• Length: 2430 bp

>NTDB_id=537281 I6K87_RS08360 WP_204982545.1 1679628..1682057(+) (clpC) [Streptococcus anginosus strain FDAARGOS_1357]
ATGAAATATTCAAAAGCTTTGACAGAAAGTATTGAGTCGGCGCAACTGCTAGCAAGCCATTTTGAAACAGATTATTTGGA
GTCTTGGCATTTGTTGATTGCCATGGCGAATAATCCTTATAGTGTTGCGGGTTCTGTTTTAAATGATTATCCGCTTGAAA
TTGATGATTTTGAGAAAGCAGCCTTTCATATCACAGGAAAGATTTATCAACAAGAGGGGAGCTTTACCATTTGGCCATTT
TCTCATCGTATGAAAGTGTTGTTTTTGACAGCTGAGCGAATTGCAGAGGCTGTACATGCTAAGAATCTTGGGACAGAGCA
TGTGTTGTTAGCTATGCTATTTGACCGAGGAAGTTTGGCGGCACGTCTCCTTGAATTCACAGGATTTAGCTATGAGGATA
AAGAAGGCGTTTTGCGCATGACCGATCTTCGGAAAAACTTAGAGCATAAGGCAAGCTGGAATAAAGAGGATTTAAAGGCG
ATTCGTCACCTAAATAAAAATGCTGCAGCAACAAGACAAACGATGGCTAATATGATGGGAATGCCTCCTGCAACCAGTGG
CGGACTAGAAGATTATACTCGTGATTTAACCGAAATGGCTCATACGGGTCTTTTAGAACCGGTCATTGGGCGGGATAAAG
AGATTTCTCGCATGCTTCAGATTTTAAGTCGCAAGACGAAAAATAATCCAGTGTTGGTAGGAGATGCAGGAGTTGGGAAG
ACAGCATTAGCCCTTGGTTTGGCGCAACGTGTGGCAGCTGGTCAAGTTCCAAATGAGCTTGCAAAGATGAGAGTTTTAGA
GCTAGATTTAATGAATGTGGTGGCTGGAACTCGTTTTCGTGGTGATTTTGAGGAACGGATGAACAATATTATCAATGATA
TTGAAGCAGATAGACATGTCATTCTTTTCATTGATGAGCTTCATACTATTATGGGGTCGGGTAGCGGGATTGACTCGACA
TTAGATGCAGCGAACATTCTCAAGCCAGCTTTGGCTAGAGGGACGCTCAGAACGGTCGGCGCAACGACACAAGAAGAGTA
CCAGAAATATATTGAAAAGGACGCAGCTCTTTCACGGCGATTTGCCAAAATTACTATTGAAGAGCCGACGGTAGCCGATA
GTATTGCGATTTTACAGGGGCTCAAGAAAAGTTATGAAGAACACCACAAAGTGGTGATTACAGATTCAGCGATTGAGACA
GCTGTTAAGTATGCTCATCGTTATCTAACAAATAAACATCTACCTGACTCGGCGATCGATTTGCTAGATGAAGCTGCCGC
AACGGTACAAAATAAAGGTCCGCAAAATCATGTAAAAACAGAATTGAGTGCAGCAGACGAGGCTTTAATGGCAGGCGATT
GGAAAAAGGTTGGCACTTTGTTGGAGAAAGAAAGTCAGCCAATTGTCTACAAACTAAAGGTTAAAGATGAGGATATTTTG
GCAACACTCAGCGGTTTATCGGGAATTCCTGTGCAAAAGTTGACGCAAACAGATGCGAAGAAATACCTCAATTTAGAAAA
GGAACTGCACAAGCGGGTCATTGGGCAAAATGAAGCAATTTCTGCTATTAGTCGAGCGATTCGGCGCAATCAATCCGGTA
TCCGCACTAGCAAGCGTCCAATTGGCTCCTTTATGTTCTTAGGGCCAACCGGGGTCGGAAAAACTGAGCTAGCTAAGGCT
TTGGCAGAAGTTCTCTTTGATGACGAAACAGCACTGATTCGTTTTGATATGAGTGAATACATGGAAAAATTTGCTGCCAG
TCGCCTCAATGGAGCGCCTCCAGGTTATGTTGGTTATGAAGAAGGGGGCGAATTAACTGAAAAAGTTCGCAATCGTCCGT
ACTCTGTACTCCTCTTTGATGAGGTAGAAAAAGCACATCCTGATATTTTCAATGTGCTTCTCCAAGTCTTAGATGACGGG
GTGCTGACAGACAGCAAGGGGCGTAAGGTGGATTTTTCCAATACCATTATCATTATGACCAGCAATCTTGGTGCGACAAG
TTTGCGGGACGACAAGACGGTTGGTTTTGGAGCACGTGATGTTCACTTTGATCATGAAAGCATGGAAAAACGGATGATGG
AAGAGCTTAAGAAAAGTTATCGTCCAGAATTTATTAACCGAATTGATGAAAAGGTTGTTTTTCACAGTTTGACTAGCGAA
GACATGCAAGAAGTGGTAAAAATCATGGTGAAACCACTCATTGTCAGTCTCGCTGAAAAAGGAATTAAACTCAAATTCCA
GCCGAGTGCTTTGAAACTTCTGGCTCAAGAGGGTTATGACCCTGAAATGGGAGCTCGTCCACTGCGCAGAACTCTACAAA
CTCAGGTAGAAGATCATTTATCCGAATTACTTTTAGCTGGTGAGTTACAGATGGGACAAAGTTTGAAAGTCGGTGTCAAA
GCTGGACAGCTGGAGTTTGAAGTGCTATGA

Domains

Predicted by InterproScan.

• AAA lid domain (AAA_lid_9) (371-439)

• ATPase family associated with various cellular activities (AAA) (AAA) (231-350)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (717-797)

• AAA domain (Cdc48 subfamily) (AAA_2) (539-710)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (14-60)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (91-130)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Streptococcus pneumoniae Rx1	77.435	100	0.776
clpC	Streptococcus pneumoniae D39	77.435	100	0.776
clpC	Streptococcus pneumoniae TIGR4	77.435	100	0.776
clpC	Streptococcus mutans UA159	66.503	100	0.67
clpC	Streptococcus thermophilus LMG 18311	66.093	100	0.665
clpC	Streptococcus thermophilus LMD-9	65.971	100	0.664
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	50.122	100	0.509
clpC	Bacillus subtilis subsp. subtilis str. 168	45.511	99.135	0.451