Detailed information    

insolico Bioinformatically predicted

Overview


Name   scnK   Type   Regulator
Locus tag   I6K87_RS02855 Genome accession   NZ_CP069892
Coordinates   577905..579215 (+) Length   436 a.a.
NCBI ID   WP_021001669.1    Uniprot ID   A0AAP6BNP2
Organism   Streptococcus anginosus strain FDAARGOS_1357     
Function   regulate comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 572905..584215
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6K87_RS02835 (I6K87_02835) - 574670..575398 (-) 729 WP_003024584.1 ABC transporter permease -
  I6K87_RS02840 (I6K87_02840) - 575395..576135 (-) 741 WP_204982741.1 ABC transporter permease -
  I6K87_RS02845 (I6K87_02845) - 576135..577043 (-) 909 WP_059220735.1 ABC transporter ATP-binding protein -
  I6K87_RS02850 (I6K87_02850) scnR 577215..577904 (+) 690 WP_003024592.1 response regulator transcription factor Regulator
  I6K87_RS02855 (I6K87_02855) scnK 577905..579215 (+) 1311 WP_021001669.1 sensor histidine kinase Regulator
  I6K87_RS02860 (I6K87_02860) nox 579512..580885 (-) 1374 WP_003029747.1 H2O-forming NADH oxidase -
  I6K87_RS02865 (I6K87_02865) - 581170..582099 (+) 930 WP_197017584.1 FAD:protein FMN transferase -
  I6K87_RS02870 (I6K87_02870) - 582119..582727 (+) 609 WP_003042854.1 NADPH-dependent FMN reductase -
  I6K87_RS02875 (I6K87_02875) - 582746..583993 (+) 1248 WP_003042107.1 NAD(P)H-dependent oxidoreductase -

Sequence


Protein


Download         Length: 436 a.a.        Molecular weight: 50020.82 Da        Isoelectric Point: 8.2547

>NTDB_id=537233 I6K87_RS02855 WP_021001669.1 577905..579215(+) (scnK) [Streptococcus anginosus strain FDAARGOS_1357]
MDTVKFFTKLLTRYVLLLLALIIGLVFVYGLVFSSYFSFYGKEKPELLYTKIAQSSQQNNFNFDKSSKIEMDKQNTWAMV
LNQDGNIVQSYHLPQQLKRHYTNADMVKFSRWYLEDYPVFSYVRGQQILVLGYPKKHSLAKFNFYANTQFIRNFLSLGLV
FLGIILLLIFILLSRSKLRIKKEMDPIITAVTSLSQGQNIALNEKGNFSEIKTALNETSHILEESNTMKEQWIRGVSHDL
RNPLMLISGYNSQLEQQYGKGKQTEEIENQIQTMKEMISNLNMSYLLDNQKHHSEFSSLDLVAVLRTVIADILNNYETIT
LHFDLPTEAVLVKGEVTLLERAFRNLLLNSIIHSGSNQIDLTYQLSDNKVLIIIADQGDITAQKITELNQKSTNYESHGM
GTVITKQIIKLHQGEIVFLDNQPGLKVIISLPLVKD

Nucleotide


Download         Length: 1311 bp        

>NTDB_id=537233 I6K87_RS02855 WP_021001669.1 577905..579215(+) (scnK) [Streptococcus anginosus strain FDAARGOS_1357]
ATGGATACCGTTAAATTTTTTACTAAGTTATTAACCAGGTATGTTCTATTACTCTTGGCTTTAATCATAGGACTTGTTTT
TGTTTATGGTTTGGTTTTCTCATCCTATTTTAGTTTCTATGGAAAGGAAAAACCGGAACTACTTTACACTAAAATCGCTC
AATCGAGTCAACAGAATAATTTTAATTTTGATAAAAGCAGCAAAATTGAAATGGATAAACAAAATACTTGGGCTATGGTA
CTGAATCAAGATGGCAATATTGTCCAATCTTATCATTTACCTCAACAGCTCAAAAGACATTATACCAATGCTGATATGGT
TAAATTTTCACGTTGGTATTTAGAAGATTACCCTGTTTTCTCCTATGTACGAGGTCAGCAAATTTTAGTTTTGGGCTATC
CTAAAAAGCATTCCTTAGCAAAATTTAATTTCTATGCTAATACACAATTTATTAGGAATTTTCTCAGTTTGGGACTTGTT
TTCTTGGGTATTATTCTTTTACTTATTTTTATTCTTTTGAGCCGATCAAAGCTACGCATTAAAAAGGAAATGGATCCGAT
TATTACTGCTGTCACTTCTTTGTCTCAGGGTCAAAATATTGCTCTTAATGAAAAGGGAAATTTCTCAGAAATTAAGACAG
CCCTTAATGAAACATCTCATATTTTGGAAGAAAGCAACACGATGAAAGAGCAATGGATTAGAGGGGTCAGTCATGATTTA
CGCAATCCTCTTATGCTCATATCAGGTTATAACAGTCAGCTAGAGCAGCAATATGGTAAAGGAAAGCAGACGGAGGAAAT
TGAAAATCAGATTCAAACTATGAAAGAAATGATTTCTAATCTCAATATGAGCTACTTATTGGATAATCAAAAGCATCACT
CCGAATTTTCGAGTCTTGATTTGGTTGCAGTCCTACGAACAGTAATTGCCGATATATTGAATAATTATGAAACAATTACA
CTTCATTTTGATTTGCCTACCGAGGCAGTGTTGGTAAAAGGAGAGGTAACTTTACTAGAAAGAGCTTTTAGAAATCTCTT
GCTTAATAGTATCATACACAGCGGTTCTAACCAGATTGATCTGACTTATCAATTATCTGATAATAAAGTGCTCATCATCA
TTGCGGATCAAGGAGATATTACAGCTCAAAAAATTACTGAGCTAAATCAAAAATCGACTAATTATGAATCACATGGTATG
GGAACGGTTATCACTAAACAAATTATTAAATTACATCAAGGTGAAATTGTTTTTTTAGACAATCAGCCAGGCTTAAAAGT
CATCATTTCTTTACCTTTAGTAAAGGACTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  scnK Streptococcus mutans UA159

83.486

100

0.835