Detailed information NTG0537115

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: LIO34_RS05035
• Genome accession: NZ_CP085085
• Coordinates: 988117..989187 (+)
• Length: 356 a.a.
• NCBI ID: WP_002935006.1
• Uniprot ID: -
• Organism: Streptococcus suis strain Ssuis_MA8
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 983117..994187

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LIO34_RS05005	-	983439..984137 (+)	699	WP_002943214.1	GntR family transcriptional regulator	-
LIO34_RS05010	-	984240..984572 (+)	333	WP_002935001.1	putative DNA-binding protein	-
LIO34_RS05015	ffh	984585..986159 (+)	1575	WP_002935002.1	signal recognition particle protein	-
LIO34_RS05020	-	986353..987021 (+)	669	WP_002935003.1	SatD family protein	-
LIO34_RS05025	-	987052..987363 (+)	312	Protein_939	DUF3307 domain-containing protein	-
LIO34_RS05030	-	987429..987950 (+)	522	WP_002935005.1	AAA family ATPase	-
LIO34_RS05035	xerS	988117..989187 (+)	1071	WP_002935006.1	tyrosine recombinase XerS	Machinery gene
LIO34_RS05040	-	989257..990765 (-)	1509	WP_013730362.1	phosphoglucomutase	-
LIO34_RS05045	-	990841..991782 (-)	942	WP_002935009.1	sensor histidine kinase	-
LIO34_RS05050	braR	991779..992444 (-)	666	WP_009909826.1	response regulator transcription factor	Regulator
LIO34_RS05055	-	992483..992689 (-)	207	WP_370287028.1	type II toxin-antitoxin system RelE/ParE family toxin	-
LIO34_RS05060	relB	992730..992969 (-)	240	WP_002935014.1	type II toxin-antitoxin system RelB family antitoxin	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41545.71 Da
• Isoelectric Point: 9.2257

>NTDB_id=537115 LIO34_RS05035 WP_002935006.1 988117..989187(+) (xerS) [Streptococcus suis strain Ssuis_MA8]
MRRELLLEKIDQLKEIMPWFVLEYYQSKLAVPYSFTTLYEYLKEYRRFFEWLQDSDLVSVERIADIPLDILEHLTKKDME
AFILYLRERPLLNANTTQNGVSQTTINRTLSALSSLFKYLTEEVENEQGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
LFLGDETMEFLDYVDKEYQVNLSKRALSSFQKNKERDLAILALLLASGVRLSEAVNLDLRDVNLNMMIIEVTRKGGKRDS
VNVAGFAKPYLEAYMSIRQQRYKAEKTDTAFFLSEYRGLPNRIDASSIEKMVAKYSADFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHANTQVTDLYTHIVNDEQKNALDQL

Nucleotide

• Length: 1071 bp

>NTDB_id=537115 LIO34_RS05035 WP_002935006.1 988117..989187(+) (xerS) [Streptococcus suis strain Ssuis_MA8]
ATGAGACGCGAGTTATTACTAGAAAAAATTGATCAACTAAAAGAAATTATGCCTTGGTTTGTTCTGGAATATTATCAGTC
AAAATTGGCTGTGCCTTACAGTTTTACTACCTTATATGAATACTTGAAAGAATACCGTCGATTCTTTGAGTGGTTACAGG
ATTCGGATTTGGTATCTGTGGAACGGATTGCTGACATTCCTTTGGATATTCTGGAACATTTGACAAAAAAAGATATGGAA
GCCTTTATTCTTTATCTGCGGGAGCGTCCCTTGCTGAACGCCAATACCACGCAGAATGGTGTGTCGCAGACCACCATTAA
CCGTACCCTGTCGGCTCTTTCTAGTCTCTTCAAGTATTTAACCGAAGAAGTGGAAAATGAGCAGGGCGAGCCCTACTTCT
ACCGCAATGTCATGAAAAAGGTATCTACCAAGAAGAAGAAGGAAACCTTGGCAGCGCGGGCTGAGAACATCAAGCAAAAG
CTCTTTTTGGGCGATGAAACCATGGAGTTCTTGGACTATGTGGACAAGGAATACCAAGTCAATCTCTCTAAACGTGCCCT
CTCCTCTTTCCAGAAAAATAAGGAGCGAGATTTGGCGATTCTGGCACTTCTCTTGGCTTCTGGCGTCCGTCTGTCAGAAG
CGGTGAATTTGGATCTTCGAGATGTAAATCTCAATATGATGATTATCGAAGTAACCCGTAAGGGTGGTAAGCGGGACTCG
GTCAATGTGGCTGGGTTTGCTAAGCCCTATCTGGAAGCCTATATGAGCATCCGTCAGCAACGCTACAAGGCTGAAAAAAC
GGATACGGCCTTCTTCCTGTCCGAATACCGTGGTCTACCCAATCGTATCGATGCTTCTTCTATTGAAAAAATGGTTGCCA
AGTACTCTGCGGACTTCAAGATACGCGTAACCCCCCACAAACTCCGTCATACCTTGGCAACTCGCCTATACGACGCCACA
AAGTCGCAAGTTCTGGTCAGTCATCAGCTGGGCCACGCCAATACTCAGGTCACTGACCTCTACACCCATATAGTCAATGA
TGAGCAAAAAAATGCACTGGATCAATTATAG

Domains

Predicted by InterProScan.

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

• Phage integrase family (Phage_integrase) (190-344)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	82.865	100	0.829