Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   JQU52_RS12575 Genome accession   NZ_CP069798
Coordinates   2462988..2463440 (+) Length   150 a.a.
NCBI ID   WP_230338815.1    Uniprot ID   A0A892ZG41
Organism   Paralysiella testudinis strain 26B     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 2457988..2468440
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JQU52_RS12550 (JQU52_12550) rclC 2458059..2458643 (+) 585 WP_230338810.1 reactive chlorine resistance membrane protein RclC -
  JQU52_RS12555 (JQU52_12555) - 2458731..2459219 (+) 489 WP_230338811.1 DUF302 domain-containing protein -
  JQU52_RS12560 (JQU52_12560) - 2459636..2459839 (-) 204 WP_230338812.1 YbdD/YjiX family protein -
  JQU52_RS12565 (JQU52_12565) - 2459832..2461919 (-) 2088 WP_230338813.1 carbon starvation CstA family protein -
  JQU52_RS12570 (JQU52_12570) - 2462273..2462986 (+) 714 WP_230338814.1 phosphoglycolate phosphatase -
  JQU52_RS12575 (JQU52_12575) recX 2462988..2463440 (+) 453 WP_230338815.1 recombination regulator RecX Regulator
  JQU52_RS12580 (JQU52_12580) - 2463924..2464181 (-) 258 WP_230338816.1 hypothetical protein -
  JQU52_RS12585 (JQU52_12585) comA 2464225..2466498 (-) 2274 WP_230338817.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  JQU52_RS12590 (JQU52_12590) - 2466675..2467009 (-) 335 Protein_2468 transposase -
  JQU52_RS12595 (JQU52_12600) - 2467030..2467242 (-) 213 WP_230338818.1 hypothetical protein -
  JQU52_RS12600 (JQU52_12605) - 2467226..2467678 (-) 453 WP_230338819.1 transposase -

Sequence

Protein


Download         Length: 150 a.a.        Molecular weight: 17143.32 Da        Isoelectric Point: 7.6116

>NTDB_id=536759 JQU52_RS12575 WP_230338815.1 2462988..2463440(+) (recX) [Paralysiella testudinis strain 26B]
MKPQPDLRQRALAILARREISRAELAQKLQQLSDNHAEINALLDELAERHWQSDTRYAEAYINSKARSHGNLRLQQALAA
KGVDADTIRQHLPDADTQQQAAIAVLHKKFSHTPADMAEKHKQMRFLAYRGFDMHTIQAALKQAWAEEDE

Nucleotide


Download         Length: 453 bp        

>NTDB_id=536759 JQU52_RS12575 WP_230338815.1 2462988..2463440(+) (recX) [Paralysiella testudinis strain 26B]
ATGAAACCCCAGCCCGACTTGCGCCAGCGTGCATTGGCCATTCTGGCACGGCGCGAAATCAGCCGCGCCGAGCTGGCGCA
AAAATTACAGCAACTCAGCGACAACCACGCCGAAATCAACGCCCTGCTGGATGAGCTGGCCGAGCGCCATTGGCAGTCCG
ACACCCGCTATGCCGAAGCCTACATCAACAGCAAAGCCCGCAGCCACGGCAACCTGCGCCTGCAACAGGCCTTGGCCGCC
AAAGGCGTGGACGCCGACACCATCCGCCAACACCTGCCCGATGCCGACACCCAACAGCAAGCGGCCATCGCCGTATTGCA
CAAAAAATTCAGCCACACCCCCGCCGATATGGCCGAAAAACACAAACAAATGCGTTTTCTGGCTTATCGCGGCTTTGATA
TGCACACCATTCAGGCAGCCTTGAAGCAGGCTTGGGCAGAAGAAGACGAATAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(35-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

58

100

0.58