Detailed information NTG0536749

Bioinformatically predicted

Overview

• Name: comL
• Type: Machinery gene
• Locus tag: JQU52_RS06555
• Genome accession: NZ_CP069798
• Coordinates: 1268494..1269291 (+)
• Length: 265 a.a.
• NCBI ID: WP_230340322.1
• Uniprot ID: A0A892ZK69
• Organism: Paralysiella testudinis strain 26B
• Function: DNA binding (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1263494..1274291

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JQU52_RS06535 (JQU52_06550)	mpl	1263584..1264975 (-)	1392	WP_230340318.1	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	-
JQU52_RS06540 (JQU52_06555)	brnQ	1265097..1266437 (-)	1341	WP_230340319.1	branched-chain amino acid transport system II carrier protein	-
JQU52_RS06545 (JQU52_06560)	pgeF	1266550..1267341 (-)	792	WP_230340320.1	peptidoglycan editing factor PgeF	-
JQU52_RS06550 (JQU52_06565)	rluD	1267371..1268495 (-)	1125	WP_230340321.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
JQU52_RS06555 (JQU52_06570)	comL	1268494..1269291 (+)	798	WP_230340322.1	outer membrane protein assembly factor BamD	Machinery gene
JQU52_RS06560 (JQU52_06575)	-	1269428..1270003 (-)	576	WP_230338719.1	IS630 family transposase	-
JQU52_RS06565 (JQU52_06580)	-	1269957..1270136 (-)	180	WP_230340323.1	winged helix-turn-helix domain-containing protein	-
JQU52_RS06570 (JQU52_06585)	-	1270148..1270330 (-)	183	WP_230340324.1	hypothetical protein	-
JQU52_RS06575 (JQU52_06590)	-	1270591..1270833 (-)	243	Protein_1278	transposase	-
JQU52_RS14855	-	1270854..1271452 (-)	599	Protein_1279	IS630 family transposase	-
JQU52_RS06585 (JQU52_06605)	-	1271379..1271909 (-)	531	WP_230340325.1	winged helix-turn-helix domain-containing protein	-
JQU52_RS06590 (JQU52_06610)	-	1271958..1272401 (-)	444	Protein_1281	transposase	-
JQU52_RS06595 (JQU52_06615)	-	1272506..1272904 (-)	399	WP_230340326.1	GCN5 family acetyltransferase	-
JQU52_RS06600 (JQU52_06620)	grxB	1272960..1273607 (-)	648	WP_230340327.1	glutaredoxin 2	-

Sequence

Protein

• Length: 265 a.a.
• Molecular weight: 30445.27 Da
• Isoelectric Point: 6.7608

>NTDB_id=536749 JQU52_RS06555 WP_230340322.1 1268494..1269291(+) (comL) [Paralysiella testudinis strain 26B]
MKKFLLMAGLAVALSACSSTGTVDKDAQITQSWSVERLYAEAHDELNSNNYNRAIKLYEILQSRYPYGRFAQQAQLDTAY
AYYKDDEPEKALAAIERFERMHPQHPNMDYALYLKALVLLNEDKSFVNKLAAQDWSDRDPKANRESYAAFAELVQRYPDS
KYAADAAEHMQKLVDALGGNEMAVARYYMNRGAYLAAINRAQSVVQHYQNTPFVEEALAMTVVAYQHLDKPQLSEDTQRV
LAQNFPNSPYLQKPWQAKKSAWWRY

Nucleotide

• Length: 798 bp

>NTDB_id=536749 JQU52_RS06555 WP_230340322.1 1268494..1269291(+) (comL) [Paralysiella testudinis strain 26B]
ATGAAAAAATTTCTTTTAATGGCCGGTTTGGCCGTGGCGTTAAGCGCCTGCTCCAGCACCGGCACGGTAGACAAAGATGC
GCAAATTACCCAAAGCTGGTCGGTAGAGCGCCTGTACGCCGAAGCGCACGATGAGTTAAACAGCAACAATTATAACCGCG
CCATCAAATTATACGAAATTTTGCAGTCGCGCTATCCTTATGGCCGCTTTGCCCAGCAAGCGCAATTGGATACCGCCTAT
GCTTACTATAAAGACGACGAGCCGGAAAAAGCGCTGGCAGCGATTGAGCGCTTTGAGCGTATGCATCCGCAACATCCGAA
TATGGATTATGCGCTGTACCTGAAAGCCTTGGTGCTGCTCAACGAAGACAAATCGTTTGTGAACAAACTGGCCGCGCAAG
ATTGGTCCGACCGCGACCCCAAAGCCAACCGCGAATCCTACGCCGCTTTTGCCGAGCTGGTGCAACGCTACCCGGACAGC
AAATACGCTGCCGATGCCGCCGAACACATGCAAAAACTGGTGGATGCCTTGGGCGGCAATGAAATGGCGGTGGCGCGCTA
CTACATGAACCGCGGCGCTTATTTGGCCGCAATCAACCGGGCGCAAAGCGTGGTTCAACACTACCAGAACACGCCTTTTG
TTGAAGAAGCCCTGGCGATGACTGTGGTGGCTTATCAGCACCTAGATAAGCCGCAATTGAGCGAAGACACCCAGCGCGTG
CTGGCGCAAAACTTCCCCAACAGCCCCTATCTGCAAAAACCTTGGCAGGCGAAAAAATCCGCCTGGTGGCGCTATTAA

Domains

Predicted by InterproScan.

• Outer membrane lipoprotein (YfiO) (36-238)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comL	Neisseria meningitidis MC58	72.075	100	0.721
comL	Neisseria gonorrhoeae MS11	71.698	100	0.717