Detailed information NTG0536647

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: JR441_RS19140
• Genome accession: NZ_CP069789
• Coordinates: 3727864..3729009 (+)
• Length: 381 a.a.
• NCBI ID: WP_029318693.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain BIM B-569G
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3722864..3734009

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JR441_RS19120 (JR441_19120)	albF	3722879..3724159 (+)	1281	WP_032722698.1	pitrilysin family protein	-
JR441_RS19125 (JR441_19125)	albG	3724156..3724857 (+)	702	WP_015250988.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
JR441_RS19130 (JR441_19130)	ywhL	3724863..3726239 (-)	1377	WP_198878427.1	YncE family protein	-
JR441_RS19135 (JR441_19135)	ywhK	3726279..3727634 (-)	1356	WP_069322965.1	YncE family protein	-
JR441_RS21165	-	3727631..3727861 (-)	231	WP_326256832.1	hypothetical protein	-
JR441_RS19140 (JR441_19140)	rapF	3727864..3729009 (+)	1146	WP_029318693.1	response regulator aspartate phosphatase RapF	Regulator
JR441_RS19145 (JR441_19145)	phrF	3728993..3729112 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
JR441_RS19150 (JR441_19150)	ywhH	3729228..3729676 (+)	449	Protein_3742	YbaK/EbsC family protein	-
JR441_RS19155 (JR441_19155)	speB	3729707..3730579 (-)	873	WP_198878426.1	agmatinase	-
JR441_RS19160 (JR441_19160)	speE	3730640..3731470 (-)	831	WP_003227543.1	spermidine synthase	-
JR441_RS19165 (JR441_19165)	pbpG	3731672..3733747 (+)	2076	WP_046664002.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45594.05 Da
• Isoelectric Point: 5.0624

>NTDB_id=536647 JR441_RS19140 WP_029318693.1 3727864..3729009(+) (rapF) [Bacillus subtilis strain BIM B-569G]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=536647 JR441_RS19140 WP_029318693.1 3727864..3729009(+) (rapF) [Bacillus subtilis strain BIM B-569G]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGATCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACATATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATAGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.95	100	0.99
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572