Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGC   Type   Machinery gene
Locus tag   JR441_RS12345 Genome accession   NZ_CP069789
Coordinates   2421759..2422055 (-) Length   98 a.a.
NCBI ID   WP_003230162.1    Uniprot ID   A0A809FGR8
Organism   Bacillus subtilis strain BIM B-569G     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2416759..2427055
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JR441_RS12300 (JR441_12300) tasA 2417167..2417952 (-) 786 WP_014664586.1 biofilm matrix protein TasA -
  JR441_RS12305 (JR441_12305) sipW 2418016..2418588 (-) 573 WP_072692741.1 signal peptidase I SipW -
  JR441_RS12310 (JR441_12310) tapA 2418572..2419333 (-) 762 WP_198878634.1 amyloid fiber anchoring/assembly protein TapA -
  JR441_RS12315 (JR441_12315) yqzG 2419605..2419931 (+) 327 WP_003246051.1 YqzG/YhdC family protein -
  JR441_RS12320 (JR441_12320) spoIITA 2419973..2420152 (-) 180 WP_072175549.1 YqzE family protein -
  JR441_RS12325 (JR441_12325) comGG 2420223..2420597 (-) 375 WP_133953114.1 ComG operon protein ComGG Machinery gene
  JR441_RS12330 (JR441_12330) comGF 2420598..2420981 (-) 384 WP_032726158.1 ComG operon protein ComGF Machinery gene
  JR441_RS12335 (JR441_12335) comGE 2421007..2421354 (-) 348 WP_080529537.1 ComG operon protein 5 Machinery gene
  JR441_RS12340 (JR441_12340) comGD 2421338..2421769 (-) 432 WP_080529538.1 comG operon protein ComGD Machinery gene
  JR441_RS12345 (JR441_12345) comGC 2421759..2422055 (-) 297 WP_003230162.1 comG operon protein ComGC Machinery gene
  JR441_RS12350 (JR441_12350) comGB 2422069..2423106 (-) 1038 WP_044052501.1 comG operon protein ComGB Machinery gene
  JR441_RS12355 (JR441_12355) comGA 2423093..2424163 (-) 1071 WP_129134318.1 competence protein ComGA Machinery gene
  JR441_RS12360 (JR441_12360) - 2424375..2424572 (-) 198 WP_129134319.1 hypothetical protein -
  JR441_RS12365 (JR441_12365) corA 2424574..2425527 (-) 954 WP_198878633.1 magnesium transporter CorA -
  JR441_RS12370 (JR441_12370) yqhB 2425670..2426995 (+) 1326 WP_198878632.1 hemolysin family protein -

Sequence

Protein


Download         Length: 98 a.a.        Molecular weight: 10849.74 Da        Isoelectric Point: 6.7083

>NTDB_id=536620 JR441_RS12345 WP_003230162.1 2421759..2422055(-) (comGC) [Bacillus subtilis strain BIM B-569G]
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKKDAV
CPNGKRIIITGGEVKVEH

Nucleotide


Download         Length: 297 bp        

>NTDB_id=536620 JR441_RS12345 WP_003230162.1 2421759..2422055(-) (comGC) [Bacillus subtilis strain BIM B-569G]
ATGAATGAGAAAGGATTTACACTTGTTGAAATGTTAATCGTGCTCTTTATTATTTCGATTTTGCTTTTAATTACGATACC
GAACGTCACGAAACATAACCAAACCATTCAAAAAAAGGGCTGTGAAGGCTTACAAAACATGGTTAAGGCACAAATGACTG
CATTTGAGCTTGATCATGAAGGACAAACTCCGAGCCTTGCCGATTTACAGTCAGAGGGCTATGTGAAAAAGGATGCTGTC
TGTCCAAATGGTAAGCGCATTATCATCACCGGCGGAGAAGTTAAGGTTGAACATTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A809FGR8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGC Bacillus subtilis subsp. subtilis str. 168

100

100

1
  comGC Staphylococcus aureus MW2

41.304

93.878

0.388
  comGC Staphylococcus aureus N315

41.304

93.878

0.388
  comYC Streptococcus suis isolate S10

49.333

76.531

0.378