Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   JR441_RS02140 Genome accession   NZ_CP069789
Coordinates   422363..423313 (+) Length   316 a.a.
NCBI ID   WP_088325307.1    Uniprot ID   -
Organism   Bacillus subtilis strain BIM B-569G     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 417363..428313
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JR441_RS02115 (JR441_02115) rapC 418823..419971 (+) 1149 WP_024571686.1 response regulator aspartate phosphatase RapC Regulator
  JR441_RS02120 (JR441_02120) phrC 419955..420077 (+) 123 WP_198878977.1 phosphatase RapC inhibitor PhrC Regulator
  JR441_RS02125 (JR441_02125) yczM 420177..420266 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  JR441_RS02130 (JR441_02130) yczN 420348..420461 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  JR441_RS02135 (JR441_02135) thrD 420614..421978 (-) 1365 WP_198878978.1 aspartate kinase -
  JR441_RS02140 (JR441_02140) ceuB 422363..423313 (+) 951 WP_088325307.1 petrobactin ABC transporter permease YclN Machinery gene
  JR441_RS02145 (JR441_02145) yclO 423306..424253 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  JR441_RS02150 (JR441_02150) yclP 424247..425005 (+) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  JR441_RS02155 (JR441_02155) yclQ 425027..425980 (+) 954 WP_038428358.1 petrobactin ABC transporter substrate-binding protein YclQ -
  JR441_RS02160 (JR441_02160) cdaE 426027..427445 (-) 1419 WP_003234482.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34885.30 Da        Isoelectric Point: 9.9364

>NTDB_id=536585 JR441_RS02140 WP_088325307.1 422363..423313(+) (ceuB) [Bacillus subtilis strain BIM B-569G]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIIIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=536585 JR441_RS02140 WP_088325307.1 422363..423313(+) (ceuB) [Bacillus subtilis strain BIM B-569G]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTATCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTAGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTTGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCAGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525