Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   JR441_RS01940 Genome accession   NZ_CP069789
Coordinates   361718..362116 (-) Length   132 a.a.
NCBI ID   WP_032722902.1    Uniprot ID   -
Organism   Bacillus subtilis strain BIM B-569G     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 356718..367116
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JR441_RS01910 (JR441_01910) yckA 357418..358098 (-) 681 WP_003234624.1 amino acid ABC transporter permease -
  JR441_RS01915 (JR441_01915) yckB 358108..358971 (-) 864 WP_029727074.1 transporter substrate-binding domain-containing protein -
  JR441_RS01920 (JR441_01920) - 359133..359325 (+) 193 Protein_334 hypothetical protein -
  JR441_RS01925 (JR441_01925) - 359361..359681 (+) 321 Protein_335 RDD family protein -
  JR441_RS01930 (JR441_01930) yckD 359763..360095 (+) 333 WP_015252849.1 YckD family protein -
  JR441_RS01935 (JR441_01935) bglC 360248..361681 (+) 1434 WP_032722901.1 6-phospho-beta-glucosidase -
  JR441_RS01940 (JR441_01940) nin/comJ 361718..362116 (-) 399 WP_032722902.1 DNA-entry nuclease inhibitor Regulator
  JR441_RS01945 (JR441_01945) nucA/comI 362143..362592 (-) 450 WP_003234608.1 DNA-entry nuclease Machinery gene
  JR441_RS01950 (JR441_01950) tlpC 362760..364481 (-) 1722 WP_029727077.1 methyl-accepting chemotaxis protein TlpC -
  JR441_RS01955 (JR441_01955) hxlB 364592..365149 (-) 558 WP_003234605.1 6-phospho-3-hexuloisomerase -
  JR441_RS01960 (JR441_01960) hxlA 365155..365787 (-) 633 WP_003234604.1 3-hexulose-6-phosphate synthase -
  JR441_RS01965 (JR441_01965) hxlR 366020..366382 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14961.94 Da        Isoelectric Point: 5.1546

>NTDB_id=536581 JR441_RS01940 WP_032722902.1 361718..362116(-) (nin/comJ) [Bacillus subtilis strain BIM B-569G]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAANGAISFEAQRNTKAFILLRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=536581 JR441_RS01940 WP_032722902.1 361718..362116(-) (nin/comJ) [Bacillus subtilis strain BIM B-569G]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAAACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

98.485

100

0.985