Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   LH646_RS27555 Genome accession   NZ_CP085039
Coordinates   6270101..6271222 (+) Length   373 a.a.
NCBI ID   WP_010645237.1    Uniprot ID   A0A385DDD7
Organism   Streptomyces sp. WA1-19     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 6265101..6276222
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LH646_RS27540 (LH646_27540) - 6265902..6267623 (-) 1722 WP_175457492.1 BACON domain-containing protein -
  LH646_RS27545 (LH646_27545) - 6267882..6268457 (+) 576 WP_030699876.1 dihydrofolate reductase family protein -
  LH646_RS27550 (LH646_27550) radA/sms 6268512..6269930 (+) 1419 WP_003948876.1 DNA repair protein RadA Machinery gene
  LH646_RS27555 (LH646_27555) disA 6270101..6271222 (+) 1122 WP_010645237.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  LH646_RS27560 (LH646_27560) - 6271305..6272114 (-) 810 WP_226965416.1 hypothetical protein -
  LH646_RS27565 (LH646_27565) - 6272471..6273220 (+) 750 WP_030699878.1 phosphatase PAP2 family protein -
  LH646_RS27570 (LH646_27570) - 6273333..6274385 (+) 1053 WP_047470995.1 A/G-specific adenine glycosylase -
  LH646_RS27575 (LH646_27575) - 6274604..6275143 (+) 540 WP_030698866.1 SigE family RNA polymerase sigma factor -
  LH646_RS27580 (LH646_27580) - 6275164..6275832 (+) 669 WP_030698867.1 lipoprotein -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 40215.10 Da        Isoelectric Point: 5.1034

>NTDB_id=536481 LH646_RS27555 WP_010645237.1 6270101..6271222(+) (disA) [Streptomyces sp. WA1-19]
MAANDRATAPGKSGGPGADGLMRASLSAVAPGTQLRDGLERILRGNTGGLIVLGWDKTVESMCTGGFVLDVEFSATRLRE
LCKLDGGIVLDKDLTKILRAGVQLVPDPTIPTDETGTRHRTADRVSKQVNFPVVSVSQSMRLIALYVDGQRRVLEDSAAI
LSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVSQRLEMVRRIAAEIAEYVVELGTDGRLLALQLDELIAG
VEPERELVVRDYVPEPTAKRSRTVDEALAELGKLSHTELLELPVVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGAI
IDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=536481 LH646_RS27555 WP_010645237.1 6270101..6271222(+) (disA) [Streptomyces sp. WA1-19]
GTGGCAGCCAATGACCGGGCAACGGCCCCCGGCAAGTCCGGCGGGCCCGGTGCCGACGGGCTGATGCGTGCCTCGCTGAG
CGCCGTCGCCCCCGGCACCCAGCTGCGGGACGGGCTGGAGCGGATTCTGCGGGGGAACACCGGCGGACTCATCGTGCTCG
GCTGGGACAAGACCGTCGAGTCGATGTGTACCGGCGGCTTCGTGCTGGACGTCGAGTTCTCCGCGACCCGCCTGCGCGAG
CTGTGCAAGCTCGACGGCGGCATCGTCCTCGACAAGGACCTCACCAAGATCCTGCGCGCCGGAGTCCAGCTCGTCCCCGA
CCCGACCATCCCCACCGACGAGACCGGCACCCGGCACCGCACCGCCGACCGCGTCTCCAAGCAGGTCAACTTCCCCGTGG
TCTCGGTCAGCCAGTCGATGCGGCTGATCGCGCTCTACGTGGACGGGCAGCGCCGGGTCCTGGAGGACTCGGCCGCCATC
CTCTCCCGCGCCAACCAGGCTCTCGCCACATTGGAGCGGTACAAGCTCCGGCTGGACGAGGTGGCCGGCACGCTCTCGGC
GCTGGAGATCGAGGACCTGGTCACGGTCCGCGACGTCACGGCCGTCTCGCAGCGGCTGGAGATGGTCCGCCGGATCGCCG
CCGAGATCGCCGAGTACGTGGTGGAACTGGGCACCGACGGGCGGCTGCTCGCCCTCCAGCTGGACGAACTGATCGCCGGC
GTCGAGCCCGAACGCGAGCTGGTCGTCCGGGACTACGTGCCGGAGCCCACGGCGAAGCGTTCCCGCACGGTGGACGAGGC
GCTGGCGGAGCTGGGCAAGCTCAGCCACACCGAGTTGCTCGAACTCCCCGTGGTGGCGCGGGCGCTCGGCTACACCGGCT
CGCCGGAGGCGCTGGACTCGGCGGTGTCGCCGCGCGGCTTCCGCCTCCTGGCGAAGGTGCCGAGGCTGCCCGGCGCCATC
ATCGACCGGCTGGTGGAGCACTTCGGCGGCCTCCAGAAGCTGCTGGCGGCCAGCGTGGACGACCTCCAGACGGTGGACGG
CGTTGGCGAGGCCCGTGCCCGCAGCGTCCGCGAGGGCCTCTCCCGCCTGGCCGAGTCGTCGATCCTGGAGCGGTACGTCT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A385DDD7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.532

92.761

0.432