Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   JN756_RS30100 Genome accession   NZ_CP069594
Coordinates   6594558..6594965 (-) Length   135 a.a.
NCBI ID   WP_010564379.1    Uniprot ID   A0A7Y8D5M8
Organism   Pseudomonas sp. Y39-6     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6589558..6599965
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JN756_RS30085 (JN756_29895) - 6591561..6593612 (-) 2052 WP_046381764.1 methyl-accepting chemotaxis protein -
  JN756_RS30090 (JN756_29900) - 6593609..6594133 (-) 525 WP_169863666.1 chemotaxis protein CheW -
  JN756_RS30095 (JN756_29905) pilH 6594146..6594511 (-) 366 WP_017844997.1 twitching motility response regulator PilH -
  JN756_RS30100 (JN756_29910) pilG 6594558..6594965 (-) 408 WP_010564379.1 twitching motility response regulator PilG Regulator
  JN756_RS30105 (JN756_29915) gshB 6595205..6596158 (+) 954 WP_057003952.1 glutathione synthase -
  JN756_RS30110 (JN756_29920) - 6596236..6597141 (+) 906 WP_017844999.1 energy transducer TonB -
  JN756_RS30115 (JN756_29925) - 6597339..6597908 (+) 570 WP_017845000.1 YqgE/AlgH family protein -
  JN756_RS30120 (JN756_29930) ruvX 6597908..6598345 (+) 438 WP_005792259.1 Holliday junction resolvase RuvX -
  JN756_RS30125 (JN756_29935) pyrR 6598430..6598936 (+) 507 WP_017845001.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  JN756_RS30130 (JN756_29940) - 6598961..6599965 (+) 1005 WP_017845002.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14906.40 Da        Isoelectric Point: 7.3842

>NTDB_id=535865 JN756_RS30100 WP_010564379.1 6594558..6594965(-) (pilG) [Pseudomonas sp. Y39-6]
MEQHSNALRVMVIDDSKTIRRTAETLLKNVGCDVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLGAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=535865 JN756_RS30100 WP_010564379.1 6594558..6594965(-) (pilG) [Pseudomonas sp. Y39-6]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGACGATTCGAAAACGATCCGCCGCACCGCCGAAACCCTGTT
GAAGAACGTGGGCTGCGATGTCATCACGGCCATCGATGGTTTCGATGCCCTGGCCCGGATTGTGGATCATCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACGTGCGCCCTGGTGAAGAACAACCCGGCGTTCAAG
TCGATCCCGGTGATCATGCTGTCTTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGTATCGTCGGTGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGGCGCGATCAAGGCCTACGTGCCGGGTTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7Y8D5M8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70.4

92.593

0.652
  vicR Streptococcus mutans UA159

38.889

93.333

0.363