Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | I6J46_RS13110 | Genome accession | NZ_CP069586 |
| Coordinates | 2761099..2761479 (+) | Length | 126 a.a. |
| NCBI ID | WP_002121425.1 | Uniprot ID | A0A009HD22 |
| Organism | Acinetobacter pittii strain FDAARGOS_1216 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2756099..2766479
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6J46_RS13080 (I6J46_13080) | kdsB | 2757005..2757766 (+) | 762 | WP_014206593.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| I6J46_RS13085 (I6J46_13085) | holB | 2757780..2758760 (+) | 981 | WP_014206594.1 | DNA polymerase III subunit delta' | - |
| I6J46_RS13090 (I6J46_13090) | pilZ | 2758771..2759112 (+) | 342 | WP_002121335.1 | PilZ domain-containing protein | - |
| I6J46_RS13095 (I6J46_13095) | ycfH | 2759130..2759903 (+) | 774 | WP_204084887.1 | TatD family hydrolase | - |
| I6J46_RS13100 (I6J46_13100) | - | 2759940..2760548 (+) | 609 | WP_014206595.1 | TetR/AcrR family transcriptional regulator | - |
| I6J46_RS13105 (I6J46_13105) | - | 2760555..2761109 (+) | 555 | WP_014206596.1 | type II secretion system protein | - |
| I6J46_RS13110 (I6J46_13110) | xcpV | 2761099..2761479 (+) | 381 | WP_002121425.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| I6J46_RS13115 (I6J46_13115) | xcpW | 2761479..2762294 (+) | 816 | WP_002121460.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| I6J46_RS13120 (I6J46_13120) | gspK | 2762295..2763254 (+) | 960 | WP_204084888.1 | type II secretion system minor pseudopilin GspK | - |
| I6J46_RS13125 (I6J46_13125) | - | 2763483..2764079 (+) | 597 | WP_002121363.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| I6J46_RS13130 (I6J46_13130) | ung | 2764133..2764846 (+) | 714 | WP_005069527.1 | uracil-DNA glycosylase | - |
| I6J46_RS13135 (I6J46_13135) | hibch | 2764843..2765967 (+) | 1125 | WP_075382888.1 | enoyl-CoA hydratase/isomerase family protein | - |
| I6J46_RS13140 (I6J46_13140) | tadA | 2765973..2766476 (+) | 504 | WP_002121378.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13976.17 Da Isoelectric Point: 9.4463
>NTDB_id=535796 I6J46_RS13110 WP_002121425.1 2761099..2761479(+) (xcpV) [Acinetobacter pittii strain FDAARGOS_1216]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIALMEINQEWLEGTQSKQVTSQGETWQI
DKSAQSTISPNVQKVDLQISLYDSDKGKVQNGITHLVFFNYPMKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIALMEINQEWLEGTQSKQVTSQGETWQI
DKSAQSTISPNVQKVDLQISLYDSDKGKVQNGITHLVFFNYPMKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=535796 I6J46_RS13110 WP_002121425.1 2761099..2761479(+) (xcpV) [Acinetobacter pittii strain FDAARGOS_1216]
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTAGCGGCTGTCGCATTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACCAAAGCTCAGTTTGTAGCAATGAATGAAATTG
CTTTAATGGAGATAAATCAGGAATGGCTTGAAGGTACTCAAAGTAAGCAAGTTACTTCTCAAGGCGAAACATGGCAGATT
GACAAATCTGCACAATCTACAATTAGCCCGAATGTTCAGAAAGTAGATTTACAAATTAGCTTATATGATTCAGATAAGGG
CAAAGTTCAAAATGGTATTACTCACTTGGTATTTTTTAATTATCCAATGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTAGCGGCTGTCGCATTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACCAAAGCTCAGTTTGTAGCAATGAATGAAATTG
CTTTAATGGAGATAAATCAGGAATGGCTTGAAGGTACTCAAAGTAAGCAAGTTACTTCTCAAGGCGAAACATGGCAGATT
GACAAATCTGCACAATCTACAATTAGCCCGAATGTTCAGAAAGTAGATTTACAAATTAGCTTATATGATTCAGATAAGGG
CAAAGTTCAAAATGGTATTACTCACTTGGTATTTTTTAATTATCCAATGAAAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
93.651 |
100 |
0.937 |