Detailed information NTG0535797

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: I6J46_RS13115
• Genome accession: NZ_CP069586
• Coordinates: 2761479..2762294 (+)
• Length: 271 a.a.
• NCBI ID: WP_002121460.1
• Uniprot ID: A0A009NS11
• Organism: Acinetobacter pittii strain FDAARGOS_1216
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2756479..2767294

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6J46_RS13080 (I6J46_13080)	kdsB	2757005..2757766 (+)	762	WP_014206593.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
I6J46_RS13085 (I6J46_13085)	holB	2757780..2758760 (+)	981	WP_014206594.1	DNA polymerase III subunit delta'	-
I6J46_RS13090 (I6J46_13090)	pilZ	2758771..2759112 (+)	342	WP_002121335.1	PilZ domain-containing protein	-
I6J46_RS13095 (I6J46_13095)	ycfH	2759130..2759903 (+)	774	WP_204084887.1	TatD family hydrolase	-
I6J46_RS13100 (I6J46_13100)	-	2759940..2760548 (+)	609	WP_014206595.1	TetR/AcrR family transcriptional regulator	-
I6J46_RS13105 (I6J46_13105)	-	2760555..2761109 (+)	555	WP_014206596.1	type II secretion system protein	-
I6J46_RS13110 (I6J46_13110)	xcpV	2761099..2761479 (+)	381	WP_002121425.1	type II secretion system minor pseudopilin GspI	Machinery gene
I6J46_RS13115 (I6J46_13115)	xcpW	2761479..2762294 (+)	816	WP_002121460.1	type II secretion system minor pseudopilin GspJ	Machinery gene
I6J46_RS13120 (I6J46_13120)	gspK	2762295..2763254 (+)	960	WP_204084888.1	type II secretion system minor pseudopilin GspK	-
I6J46_RS13125 (I6J46_13125)	-	2763483..2764079 (+)	597	WP_002121363.1	6-pyruvoyl trahydropterin synthase family protein	-
I6J46_RS13130 (I6J46_13130)	ung	2764133..2764846 (+)	714	WP_005069527.1	uracil-DNA glycosylase	-
I6J46_RS13135 (I6J46_13135)	hibch	2764843..2765967 (+)	1125	WP_075382888.1	enoyl-CoA hydratase/isomerase family protein	-
I6J46_RS13140 (I6J46_13140)	tadA	2765973..2766476 (+)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
I6J46_RS13145 (I6J46_13145)	-	2766547..2766987 (+)	441	WP_204084889.1	SRPBCC family protein	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30932.32 Da
• Isoelectric Point: 9.9694

>NTDB_id=535797 I6J46_RS13115 WP_002121460.1 2761479..2762294(+) (xcpW) [Acinetobacter pittii strain FDAARGOS_1216]
MIKNKSFRSPSSASRLAVRSEQMMRGYSEQSSSSCTQTKHCFKDSHTRNIVSHLATRSSSARLTRASGFTLVELLVSIAI
FAILSLLGWKVFDYLLKVRDRNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLK
QGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKG
IKMQLTVAGVNYEWIYSLNQGDLSLSKQGGQ

Nucleotide

• Length: 816 bp

>NTDB_id=535797 I6J46_RS13115 WP_002121460.1 2761479..2762294(+) (xcpW) [Acinetobacter pittii strain FDAARGOS_1216]
ATGATAAAGAATAAAAGTTTTCGCTCTCCAAGCTCAGCTTCACGTCTTGCGGTACGATCGGAGCAGATGATGAGGGGTTA
CTCCGAGCAAAGCTCTTCGTCTTGCACTCAGACAAAGCATTGCTTTAAAGACTCTCACACTCGAAACATAGTTTCTCATC
TTGCGACACGATCGAGCAGTGCTCGATTAACTCGTGCCTCAGGATTTACTTTAGTTGAGCTTTTAGTTTCAATTGCAATT
TTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGACTATTTATTAAAAGTTCGCGATCGTAATACTCAACATGAAGT
GCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTATACCTTTATCAGCCAATCAAG
GCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGGGTGTTACTGATCCATTAAAG
CAAGGATTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTTTATCGCCTTAAATATAGTAA
CTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACAATTTCAAATTATGGTTTTGA
CACCTCAAGAGGTAACAAAGTGGCCTGAAGTTAATATTGACCCTACAAAACCTGATGAATTTAGGAAGTTGCCAAAAGGA
ATAAAAATGCAACTCACGGTTGCAGGTGTAAATTATGAGTGGATTTATAGCTTAAACCAAGGTGACTTATCGCTCTCCAA
ACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

3D structure

• AlphaFold DB: A0A009NS11

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	88.889	83.026	0.738