Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   I6J46_RS05495 Genome accession   NZ_CP069586
Coordinates   1159952..1161106 (-) Length   384 a.a.
NCBI ID   WP_204085734.1    Uniprot ID   -
Organism   Acinetobacter pittii strain FDAARGOS_1216     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1154952..1166106
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J46_RS05475 (I6J46_05475) - 1156106..1156759 (+) 654 WP_080631244.1 TetR/AcrR family transcriptional regulator -
  I6J46_RS05480 (I6J46_05480) - 1156864..1157784 (+) 921 WP_002114137.1 DMT family transporter -
  I6J46_RS05485 (I6J46_05485) yrdC 1158177..1158746 (-) 570 WP_068612792.1 L-threonylcarbamoyladenylate synthase -
  I6J46_RS05490 (I6J46_05490) dprA 1158798..1159931 (-) 1134 WP_204085733.1 DNA-processing protein DprA Machinery gene
  I6J46_RS05495 (I6J46_05495) tsaP 1159952..1161106 (-) 1155 WP_204085734.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  I6J46_RS05500 (I6J46_05500) def 1161229..1161759 (+) 531 WP_002114101.1 peptide deformylase -
  I6J46_RS05505 (I6J46_05505) - 1161803..1162228 (+) 426 WP_204085735.1 DUF2946 family protein -
  I6J46_RS05510 (I6J46_05510) oprC 1162301..1164415 (+) 2115 WP_204085736.1 TonB-dependent copper receptor -
  I6J46_RS05515 (I6J46_05515) - 1164469..1164675 (+) 207 WP_005072046.1 hypothetical protein -
  I6J46_RS05520 (I6J46_05520) - 1164743..1165957 (-) 1215 WP_204085737.1 oxygenase MpaB family protein -

Sequence


Protein


Download         Length: 384 a.a.        Molecular weight: 42568.49 Da        Isoelectric Point: 7.2977

>NTDB_id=535775 I6J46_RS05495 WP_204085734.1 1159952..1161106(-) (tsaP) [Acinetobacter pittii strain FDAARGOS_1216]
MKKVFDGMVQFHALGIKKHLLALALFTGVAFGTVAEVYAASPNHNPPSLKSNAPHVYVVKRGDTLWDISGHFISKPWRWP
EIWASNQHVKNPHWIYPGDRLLLCSLDGRPLVGKDEGDGCVGIIRRYTGQMTNLQPQVRVESLNNNVPVIPLEHIKQWLE
HSTILPIDAIQHTPYVVGTADQRVLAAKGQTIYARGQGLIDGQRYAVYREGEPYYFTDNKGKKHSLGIELQQVASGIAIS
SEKDITTLELTDSYNSEVRRGDRVMPEEEATLPTLFYPVDATQVTDGGKIIRVMGSIGTAAKNSVVTLDRGTAQGIQVGQ
VFDITQQGETIRDPKTKEPIQLPGQQIGSLMVFRTFDQLSYAYVLESDLPVKVGSSIQPPRFND

Nucleotide


Download         Length: 1155 bp        

>NTDB_id=535775 I6J46_RS05495 WP_204085734.1 1159952..1161106(-) (tsaP) [Acinetobacter pittii strain FDAARGOS_1216]
ATGAAAAAGGTTTTTGACGGCATGGTTCAATTTCATGCTTTGGGGATAAAAAAGCATTTACTTGCTTTAGCACTTTTTAC
AGGGGTTGCATTCGGTACAGTAGCAGAGGTTTATGCTGCTAGTCCAAACCATAATCCACCCTCTCTTAAAAGTAATGCAC
CACATGTCTACGTTGTAAAACGAGGAGATACGCTATGGGATATTTCCGGTCATTTTATAAGCAAACCTTGGCGCTGGCCT
GAAATTTGGGCAAGCAACCAACATGTTAAAAATCCACACTGGATTTATCCAGGTGATCGATTACTGTTATGTAGTTTAGA
TGGCCGTCCATTGGTTGGAAAAGATGAGGGAGATGGCTGTGTCGGCATTATTCGCCGTTACACAGGTCAAATGACAAATT
TACAACCTCAAGTTCGTGTGGAGTCACTTAACAATAACGTACCTGTTATTCCTCTTGAACATATCAAACAATGGTTAGAA
CACAGCACTATTCTACCTATCGATGCAATTCAACATACTCCTTATGTAGTCGGTACTGCCGATCAACGTGTACTGGCGGC
AAAAGGTCAAACTATTTATGCGCGCGGACAAGGTTTAATTGATGGTCAACGTTATGCAGTTTATCGTGAAGGTGAACCTT
ATTATTTCACCGACAATAAAGGCAAAAAGCACAGTCTAGGTATTGAGCTACAACAAGTTGCCTCGGGGATTGCGATCTCT
TCTGAAAAAGACATTACCACGCTTGAGTTAACTGATAGCTACAATTCTGAAGTACGTCGTGGTGATCGGGTGATGCCAGA
AGAAGAAGCAACATTACCTACTTTGTTTTATCCGGTGGATGCCACTCAGGTGACGGACGGCGGCAAAATTATTCGTGTAA
TGGGATCAATTGGTACTGCTGCCAAAAATAGTGTGGTCACTTTAGATCGCGGTACGGCACAAGGTATTCAAGTAGGACAA
GTTTTTGATATTACGCAACAAGGTGAAACCATTCGAGATCCTAAAACCAAAGAACCAATACAGTTACCAGGACAACAAAT
TGGTAGTCTGATGGTCTTTAGAACTTTTGATCAGTTGAGTTATGCCTACGTATTAGAAAGCGATTTACCAGTTAAAGTTG
GTTCAAGCATTCAGCCACCCCGCTTTAATGATTAA

Domains


Predicted by InterproScan.

(57-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

90.885

100

0.909