Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | I6J35_RS04950 | Genome accession | NZ_CP069567 |
| Coordinates | 986323..987297 (+) | Length | 324 a.a. |
| NCBI ID | WP_047130994.1 | Uniprot ID | A0AB37HCC2 |
| Organism | Staphylococcus condimenti strain FDAARGOS_1205 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 981323..992297
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6J35_RS04920 (I6J35_04920) | - | 982113..982655 (+) | 543 | WP_047130988.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| I6J35_RS04925 (I6J35_04925) | - | 982672..984132 (+) | 1461 | WP_047130989.1 | rhomboid family protein | - |
| I6J35_RS04930 (I6J35_04930) | - | 984113..984313 (+) | 201 | WP_047130990.1 | YqgQ family protein | - |
| I6J35_RS04935 (I6J35_04935) | - | 984313..985299 (+) | 987 | WP_047130991.1 | ROK family glucokinase | - |
| I6J35_RS04940 (I6J35_04940) | - | 985299..985628 (+) | 330 | WP_047130992.1 | MTH1187 family thiamine-binding protein | - |
| I6J35_RS04945 (I6J35_04945) | - | 985628..986251 (+) | 624 | WP_047130993.1 | MBL fold metallo-hydrolase | - |
| I6J35_RS04950 (I6J35_04950) | comGA | 986323..987297 (+) | 975 | WP_047130994.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| I6J35_RS04955 (I6J35_04955) | comGB | 987269..988342 (+) | 1074 | WP_047130995.1 | competence type IV pilus assembly protein ComGB | - |
| I6J35_RS04960 (I6J35_04960) | comGC | 988360..988686 (+) | 327 | WP_047130996.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| I6J35_RS04965 (I6J35_04965) | - | 988706..989119 (+) | 414 | WP_232011920.1 | prepilin-type cleavage/methylation domain-containing protein | - |
| I6J35_RS04970 (I6J35_04970) | - | 989100..989393 (+) | 294 | WP_047130998.1 | hypothetical protein | - |
| I6J35_RS04975 (I6J35_04975) | comGF | 989335..989811 (+) | 477 | WP_047130999.1 | competence type IV pilus minor pilin ComGF | - |
| I6J35_RS04980 (I6J35_04980) | - | 989976..990515 (+) | 540 | WP_152650907.1 | shikimate kinase | - |
| I6J35_RS04985 (I6J35_04985) | gcvT | 990707..991801 (+) | 1095 | WP_070704818.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36915.69 Da Isoelectric Point: 6.9948
>NTDB_id=535644 I6J35_RS04950 WP_047130994.1 986323..987297(+) (comGA) [Staphylococcus condimenti strain FDAARGOS_1205]
MKRLLDTILTDAISKNVSDIHFIPIEKEVLIKFRIHDELINYDNIEILTYSKLLTFMKFQAGLDVSNYHQAQSGQTTFKH
QKLFNLRISTLPLSLGIESCVIRLSPQYFYQDGNCDGPKHFYHLMNKKQGLILFTGPTGSGKSTMMYEMVSFALKNLHLN
IITVEDPVEKRISGITQISVNEKAGIDYENSFKAILRCDPDIILIGEIRDAHIAKCVIQAALSGHLVLSTLHSNDCEGAL
LRLLEMGISPQEAQQSIALISNQRLVTNQHGSRELAYETMYQSDIQYFFKHDHTMPKHFMKLSKVLTQMSEEGVICEEVL
KRYT
MKRLLDTILTDAISKNVSDIHFIPIEKEVLIKFRIHDELINYDNIEILTYSKLLTFMKFQAGLDVSNYHQAQSGQTTFKH
QKLFNLRISTLPLSLGIESCVIRLSPQYFYQDGNCDGPKHFYHLMNKKQGLILFTGPTGSGKSTMMYEMVSFALKNLHLN
IITVEDPVEKRISGITQISVNEKAGIDYENSFKAILRCDPDIILIGEIRDAHIAKCVIQAALSGHLVLSTLHSNDCEGAL
LRLLEMGISPQEAQQSIALISNQRLVTNQHGSRELAYETMYQSDIQYFFKHDHTMPKHFMKLSKVLTQMSEEGVICEEVL
KRYT
Nucleotide
Download Length: 975 bp
>NTDB_id=535644 I6J35_RS04950 WP_047130994.1 986323..987297(+) (comGA) [Staphylococcus condimenti strain FDAARGOS_1205]
ATGAAAAGACTTTTAGATACAATTCTGACAGATGCTATTTCTAAAAATGTTTCTGACATTCATTTTATTCCTATCGAAAA
AGAAGTTTTAATTAAGTTCAGAATTCATGATGAGCTGATAAATTATGACAACATAGAGATTCTGACATATTCAAAGTTAC
TTACATTTATGAAATTTCAAGCAGGTCTCGATGTGTCTAATTATCATCAAGCGCAAAGTGGACAGACTACTTTTAAGCAT
CAAAAATTGTTTAATTTACGTATTTCAACATTACCGCTATCTTTAGGAATTGAGAGTTGTGTCATACGACTTTCTCCACA
ATATTTCTATCAAGATGGTAATTGTGATGGACCAAAACATTTCTATCATCTAATGAATAAAAAACAAGGACTTATTTTAT
TTACAGGTCCAACTGGATCTGGAAAAAGCACTATGATGTATGAAATGGTTTCATTTGCTTTGAAAAATTTACACCTAAAT
ATTATTACTGTTGAGGATCCGGTTGAAAAAAGGATTTCAGGTATTACTCAAATTTCAGTAAACGAAAAAGCAGGTATTGA
TTATGAAAATTCATTCAAAGCTATATTGCGTTGTGATCCCGATATAATTCTCATCGGAGAAATAAGGGATGCTCATATTG
CAAAATGTGTAATTCAAGCAGCATTAAGCGGACATTTGGTACTATCCACTTTGCATTCAAATGATTGTGAAGGTGCTTTA
TTGAGGTTATTAGAAATGGGTATATCTCCTCAAGAAGCACAACAATCCATTGCTCTAATTTCAAATCAACGTCTCGTAAC
TAATCAGCATGGAAGCAGAGAATTGGCTTATGAAACGATGTATCAGTCTGATATTCAATATTTCTTCAAACATGACCACA
CAATGCCTAAGCATTTTATGAAGTTAAGCAAAGTGTTAACTCAAATGAGTGAAGAAGGTGTTATCTGTGAAGAAGTACTT
AAAAGATATACTTAA
ATGAAAAGACTTTTAGATACAATTCTGACAGATGCTATTTCTAAAAATGTTTCTGACATTCATTTTATTCCTATCGAAAA
AGAAGTTTTAATTAAGTTCAGAATTCATGATGAGCTGATAAATTATGACAACATAGAGATTCTGACATATTCAAAGTTAC
TTACATTTATGAAATTTCAAGCAGGTCTCGATGTGTCTAATTATCATCAAGCGCAAAGTGGACAGACTACTTTTAAGCAT
CAAAAATTGTTTAATTTACGTATTTCAACATTACCGCTATCTTTAGGAATTGAGAGTTGTGTCATACGACTTTCTCCACA
ATATTTCTATCAAGATGGTAATTGTGATGGACCAAAACATTTCTATCATCTAATGAATAAAAAACAAGGACTTATTTTAT
TTACAGGTCCAACTGGATCTGGAAAAAGCACTATGATGTATGAAATGGTTTCATTTGCTTTGAAAAATTTACACCTAAAT
ATTATTACTGTTGAGGATCCGGTTGAAAAAAGGATTTCAGGTATTACTCAAATTTCAGTAAACGAAAAAGCAGGTATTGA
TTATGAAAATTCATTCAAAGCTATATTGCGTTGTGATCCCGATATAATTCTCATCGGAGAAATAAGGGATGCTCATATTG
CAAAATGTGTAATTCAAGCAGCATTAAGCGGACATTTGGTACTATCCACTTTGCATTCAAATGATTGTGAAGGTGCTTTA
TTGAGGTTATTAGAAATGGGTATATCTCCTCAAGAAGCACAACAATCCATTGCTCTAATTTCAAATCAACGTCTCGTAAC
TAATCAGCATGGAAGCAGAGAATTGGCTTATGAAACGATGTATCAGTCTGATATTCAATATTTCTTCAAACATGACCACA
CAATGCCTAAGCATTTTATGAAGTTAAGCAAAGTGTTAACTCAAATGAGTGAAGAAGGTGTTATCTGTGAAGAAGTACTT
AAAAGATATACTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
59.752 |
99.691 |
0.596 |
| comGA | Staphylococcus aureus N315 |
59.752 |
99.691 |
0.596 |