Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   I6J38_RS09535 Genome accession   NZ_CP069558
Coordinates   1880377..1881423 (+) Length   348 a.a.
NCBI ID   WP_020997603.1    Uniprot ID   U2ZRI1
Organism   Streptococcus constellatus strain FDAARGOS_1208     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1875377..1886423
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J38_RS09505 (I6J38_09505) tsaE 1876764..1877204 (+) 441 WP_003070375.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  I6J38_RS09510 (I6J38_09510) - 1877197..1877718 (+) 522 WP_003070373.1 GNAT family N-acetyltransferase -
  I6J38_RS09515 (I6J38_09515) brpA 1877726..1878832 (+) 1107 WP_003070371.1 biofilm formation/cell division transcriptional regulator BrpA -
  I6J38_RS09520 (I6J38_09520) - 1878873..1879160 (-) 288 WP_006267192.1 hypothetical protein -
  I6J38_RS09525 (I6J38_09525) - 1879170..1879580 (-) 411 WP_006267256.1 HIT family protein -
  I6J38_RS09530 (I6J38_09530) pptA 1879649..1880380 (+) 732 WP_003033712.1 ABC transporter ATP-binding protein Regulator
  I6J38_RS09535 (I6J38_09535) pptB 1880377..1881423 (+) 1047 WP_020997603.1 ABC transporter permease Regulator
  I6J38_RS09540 (I6J38_09540) ccrZ 1881474..1882271 (+) 798 WP_006267497.1 cell cycle regulator CcrZ -
  I6J38_RS09545 (I6J38_09545) trmB 1882268..1882903 (+) 636 WP_006267578.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  I6J38_RS09550 (I6J38_09550) - 1883308..1884000 (+) 693 WP_006267630.1 VIT1/CCC1 transporter family protein -
  I6J38_RS09555 (I6J38_09555) rimP 1884212..1884700 (+) 489 WP_006267077.1 ribosome maturation factor RimP -
  I6J38_RS09560 (I6J38_09560) nusA 1884754..1885947 (+) 1194 WP_003078357.1 transcription termination factor NusA -
  I6J38_RS09565 (I6J38_09565) rnpM 1885958..1886254 (+) 297 WP_003070354.1 RNase P modulator RnpM -

Sequence

Protein


Download         Length: 348 a.a.        Molecular weight: 41036.43 Da        Isoelectric Point: 10.4750

>NTDB_id=535558 I6J38_RS09535 WP_020997603.1 1880377..1881423(+) (pptB) [Streptococcus constellatus strain FDAARGOS_1208]
MRNLFQKRRQVFRNQCLKYSRYVFNDHFVLFLLVFIGFLAVQYSQLLRSFPKNHLPIILALVVLLFLLLPLGRIATYMEK
PDSLFLLVKEEELKSYLQEQTRLSYRLWALLQTVVLLLLVPLFLALGMPLWGWFILVFLMLIAKWFVFLQKSQKFYQGAG
VNWSYLIAYEERRKQTILRFFALFTNVKGISNSVKRRAYLDGLTNILPKRQSTTWQNIYLRSYLRNGDFLALTIRLLFLS
LLGIGFISQSWIAAIFVALLNYLLLFQLTALYNAFDYQYLTFLFPLETGLKLKGVKQVIILIGYSVLFVETMMALLFFQD
RVALLFMIGITLLLYFIYLPFKLRSLVD

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=535558 I6J38_RS09535 WP_020997603.1 1880377..1881423(+) (pptB) [Streptococcus constellatus strain FDAARGOS_1208]
ATGAGAAATCTGTTTCAAAAGCGCAGGCAAGTATTTCGCAATCAATGTTTGAAGTATTCACGCTATGTTTTTAATGACCA
TTTTGTCCTCTTTTTATTGGTCTTTATTGGCTTTTTAGCTGTTCAATACAGTCAACTGTTACGAAGTTTTCCTAAAAATC
ACCTGCCAATCATTCTTGCTTTAGTGGTTCTTTTGTTCTTATTATTGCCTTTGGGACGAATCGCGACTTATATGGAAAAA
CCAGATAGTCTGTTTTTATTGGTCAAAGAAGAGGAATTAAAAAGCTACCTACAAGAACAAACGCGTTTATCTTATCGATT
ATGGGCCTTGCTTCAAACCGTTGTGTTGTTACTATTAGTACCGCTTTTTCTTGCCTTAGGCATGCCGCTTTGGGGCTGGT
TTATTCTTGTTTTTCTTATGTTGATAGCAAAATGGTTCGTATTTTTGCAGAAAAGTCAAAAATTTTACCAAGGTGCAGGG
GTGAATTGGAGCTATCTCATTGCTTATGAAGAAAGACGTAAGCAGACAATCCTACGTTTCTTTGCTCTCTTTACCAATGT
CAAAGGAATTTCTAATAGTGTGAAACGCCGTGCGTATCTTGATGGTTTGACAAATATTCTACCCAAAAGACAGTCAACTA
CTTGGCAAAATATATATTTGCGTTCTTATTTACGAAATGGTGATTTTCTGGCCTTGACTATACGGTTGCTGTTTCTGTCT
CTTTTGGGAATTGGTTTTATCAGTCAATCATGGATTGCGGCTATTTTCGTAGCTTTGTTGAATTATCTCTTGCTATTTCA
GTTGACAGCCTTGTACAATGCTTTTGATTATCAATATTTGACGTTCTTATTTCCTTTGGAAACTGGATTGAAATTAAAAG
GAGTGAAACAAGTGATTATTCTTATTGGCTACAGCGTGCTTTTTGTGGAAACAATGATGGCTTTGTTGTTTTTCCAAGAT
AGAGTAGCTTTGCTTTTTATGATTGGAATTACATTGCTACTTTATTTCATCTATTTACCATTTAAATTAAGAAGTTTGGT
TGACTAA

Domains

Predicted by InterproScan.

Bacterial ABC transporter protein EcsB (EcsB)

(3-158)

Bacterial ABC transporter protein EcsB (EcsB)

(160-330)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB U2ZRI1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

48.276

100

0.483
  pptB Streptococcus salivarius strain HSISS4

47.414

100

0.474