Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   I6J38_RS05820 Genome accession   NZ_CP069558
Coordinates   1166102..1167169 (-) Length   355 a.a.
NCBI ID   WP_006268109.1    Uniprot ID   F9P7H5
Organism   Streptococcus constellatus strain FDAARGOS_1208     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1161102..1172169
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J38_RS05800 (I6J38_05800) - 1161733..1163187 (+) 1455 WP_020998023.1 sucrose-6-phosphate hydrolase -
  I6J38_RS05805 (I6J38_05805) - 1163168..1164133 (+) 966 WP_006268416.1 LacI family DNA-binding transcriptional regulator -
  I6J38_RS05810 (I6J38_05810) - 1164203..1165025 (-) 823 Protein_1154 Cof-type HAD-IIB family hydrolase -
  I6J38_RS05815 (I6J38_05815) amiF 1165168..1166091 (-) 924 WP_006268357.1 ATP-binding cassette domain-containing protein Regulator
  I6J38_RS05820 (I6J38_05820) amiE 1166102..1167169 (-) 1068 WP_006268109.1 ABC transporter ATP-binding protein Regulator
  I6J38_RS05825 (I6J38_05825) amiD 1167178..1168104 (-) 927 WP_006268005.1 oligopeptide ABC transporter permease OppC Regulator
  I6J38_RS05830 (I6J38_05830) amiC 1168104..1169600 (-) 1497 WP_006268182.1 ABC transporter permease Regulator
  I6J38_RS05835 (I6J38_05835) amiA3 1169964..1171943 (-) 1980 WP_020998025.1 peptide ABC transporter substrate-binding protein Regulator

Sequence


Protein


Download         Length: 355 a.a.        Molecular weight: 39582.24 Da        Isoelectric Point: 4.7899

>NTDB_id=535526 I6J38_RS05820 WP_006268109.1 1166102..1167169(-) (amiE) [Streptococcus constellatus strain FDAARGOS_1208]
MTQEKNVILTARDIVVEFDVRDKVLTAIRGVSLDLIEGEVLALVGESGSGKSVLTKTFTGMLEDNGRVAQGSINYRGQDL
TKLKSNKDWEPIRGVKIATIFQDPMTSLDPINTIGSQITEVIVKHQKKTAKEAKEMAIDYMNKVGIPDAEKRFSEYPFQY
SGGMRQRIVIAIALACRPDILICDEPTTALDVTIQAQIIDLLKSLQQEYQFTTIFITHDLGVVASIADKVAVMYAGEIVE
YGTVEDVFYDPRHPYTWSLLSSLPQLADDKGELYSIPGTPPSLYSHLQGDAFALRSDYAMEIDFEEKPPQIYVSDTHWAK
TWLLHENAPKVNKPAVIDDLHEKISSKMGFAHLDA

Nucleotide


Download         Length: 1068 bp        

>NTDB_id=535526 I6J38_RS05820 WP_006268109.1 1166102..1167169(-) (amiE) [Streptococcus constellatus strain FDAARGOS_1208]
ATGACACAAGAAAAAAATGTAATATTGACTGCCCGCGATATTGTCGTGGAATTTGACGTTCGTGATAAAGTCTTAACCGC
CATTCGTGGTGTATCACTTGACCTCATCGAAGGTGAAGTTCTTGCTCTCGTAGGAGAGTCAGGTTCTGGTAAATCTGTTT
TAACAAAGACTTTTACTGGAATGTTAGAGGATAATGGTCGAGTAGCGCAAGGATCGATTAACTATCGTGGACAAGATTTG
ACAAAATTGAAATCCAATAAAGATTGGGAACCTATTCGTGGTGTTAAAATTGCGACTATTTTCCAAGACCCAATGACAAG
TTTAGACCCAATTAACACGATTGGTAGCCAGATTACAGAAGTTATTGTAAAACATCAAAAGAAAACGGCAAAAGAAGCGA
AGGAAATGGCTATTGACTATATGAATAAAGTCGGTATTCCTGATGCTGAAAAGCGTTTTAGTGAGTATCCTTTCCAATAT
TCAGGAGGAATGCGTCAACGGATCGTTATTGCCATTGCGCTTGCTTGTCGTCCTGATATCCTAATCTGTGATGAACCTAC
AACAGCGCTTGATGTTACCATTCAAGCACAAATCATTGATTTGTTGAAATCATTGCAACAAGAGTATCAATTCACTACTA
TTTTTATCACCCACGACCTTGGAGTGGTAGCAAGTATTGCGGATAAAGTTGCCGTTATGTATGCTGGAGAAATCGTCGAG
TATGGTACAGTAGAAGACGTCTTTTATGATCCACGTCATCCTTATACTTGGAGCTTGTTATCAAGCTTGCCACAGTTGGC
AGATGATAAAGGAGAGCTTTACTCTATTCCTGGCACACCGCCGTCTCTTTATTCACACTTGCAAGGAGATGCTTTCGCTC
TTCGTTCAGATTATGCGATGGAAATTGATTTTGAGGAAAAACCACCTCAAATCTATGTATCAGATACACATTGGGCAAAA
ACGTGGTTGCTTCATGAAAATGCTCCAAAAGTGAATAAACCTGCTGTTATTGATGATTTACATGAAAAAATTAGCTCAAA
AATGGGTTTTGCTCATTTAGACGCTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB F9P7H5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

86.402

99.437

0.859

  amiE Streptococcus thermophilus LMG 18311

84.986

99.437

0.845

  amiE Streptococcus thermophilus LMD-9

84.986

99.437

0.845

  oppD Streptococcus mutans UA159

55.65

99.718

0.555