Detailed information NTG0534753

Bioinformatically predicted

Overview

• Name: pilW
• Type: Machinery gene
• Locus tag: LDO71_RS01665
• Genome accession: NZ_CP084297
• Coordinates: 359805..360842 (+)
• Length: 345 a.a.
• NCBI ID: WP_114159401.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain LHC22-2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 354805..365842

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LDO71_RS01630 (LDO71_01630)	-	356465..356595 (-)	131	Protein_312	hypothetical protein	-
LDO71_RS01635 (LDO71_01635)	rpoZ	356634..356912 (-)	279	WP_000135049.1	DNA-directed RNA polymerase subunit omega	-
LDO71_RS01640 (LDO71_01640)	gmk	356985..357614 (-)	630	WP_000015937.1	guanylate kinase	-
LDO71_RS01645 (LDO71_01645)	ispH	357737..358687 (+)	951	WP_000407064.1	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	-
LDO71_RS01650 (LDO71_01650)	-	358700..358951 (-)	252	Protein_316	hypothetical protein	-
LDO71_RS01655 (LDO71_01655)	fimU	358857..359306 (+)	450	WP_114155191.1	GspH/FimT family pseudopilin	Machinery gene
LDO71_RS01660 (LDO71_01660)	pilV	359303..359803 (+)	501	WP_004745401.1	type IV pilus modification protein PilV	Machinery gene
LDO71_RS01665 (LDO71_01665)	pilW	359805..360842 (+)	1038	WP_114159401.1	PilW family protein	Machinery gene
LDO71_RS01670 (LDO71_01670)	-	360839..361621 (+)	783	WP_114159403.1	pilus assembly PilX N-terminal domain-containing protein	-
LDO71_RS01675 (LDO71_01675)	-	361637..365311 (+)	3675	WP_225546082.1	PilC/PilY family type IV pilus protein	-
LDO71_RS01680 (LDO71_01680)	pilY2	365325..365801 (+)	477	WP_031380019.1	type IV pilin protein	Machinery gene

Sequence

Protein

• Length: 345 a.a.
• Molecular weight: 37495.40 Da
• Isoelectric Point: 7.8380

>NTDB_id=534753 LDO71_RS01665 WP_114159401.1 359805..360842(+) (pilW) [Acinetobacter baumannii strain LHC22-2]
MKKHQGFTLIELILSLALGLIITAAAILLFLTSQKSLSMQVGVSDLQDNANFGLNYLSQDIRLANLNNPKAVINDQTAYG
GIVLTSAINSAKDAANEPLSNLYKTIIGVTANTNLLSRSQGHSVGSGNAWTGASNVQSNGSDIASDQLVIQYVPQYTIDT
KSTATQADDEYIGGTDCEGNNLNFPLASGRQVIIQRYFLRKDAKNNSDEPNQPLALACDAGYYPLTGNPTAVTRYGDAGE
IIMKRVDYFRVLLNVQGNSGRRYISIHDYLNLTAPRPRIVSVQIGLLTRSLQPVGAEIAIKDDQQFSVLDQTITVKKPEN
STKKYVRQVISQTIALRNVIGERGE

Nucleotide

• Length: 1038 bp

>NTDB_id=534753 LDO71_RS01665 WP_114159401.1 359805..360842(+) (pilW) [Acinetobacter baumannii strain LHC22-2]
ATGAAAAAACATCAAGGTTTTACATTAATCGAGTTAATACTTTCGTTAGCCTTAGGTCTTATAATTACTGCAGCTGCAAT
ATTATTATTTTTGACTAGTCAAAAAAGTTTATCTATGCAGGTCGGAGTATCTGATTTACAAGATAATGCTAATTTTGGAC
TTAACTATTTATCTCAAGATATTCGTCTTGCGAATTTAAATAACCCCAAAGCAGTTATTAATGATCAAACTGCTTATGGC
GGTATTGTTCTAACCTCTGCGATTAATTCAGCTAAAGATGCTGCTAATGAACCTCTTAGTAATCTATATAAAACTATTAT
TGGGGTAACTGCTAACACTAATTTACTTTCACGTAGTCAGGGACATAGTGTCGGTAGTGGTAATGCTTGGACGGGAGCGT
CAAATGTCCAAAGTAATGGAAGTGATATCGCTAGTGACCAACTCGTTATTCAATATGTACCACAATATACAATTGATACA
AAAAGTACTGCAACTCAAGCTGATGATGAATATATAGGCGGTACAGATTGCGAAGGAAATAATTTGAATTTTCCTCTTGC
TAGTGGGCGACAAGTCATAATCCAACGTTATTTTTTACGTAAAGACGCTAAAAATAATAGTGATGAACCTAACCAACCTT
TAGCACTTGCTTGTGATGCCGGCTATTACCCATTAACTGGTAACCCAACTGCTGTAACTCGTTATGGGGATGCAGGTGAA
ATTATAATGAAACGTGTGGATTATTTTCGGGTTTTACTAAATGTTCAAGGGAATTCTGGACGACGTTATATTTCAATACA
TGATTATTTGAACTTGACAGCACCTCGGCCACGTATTGTTTCAGTCCAAATTGGCTTATTAACACGTTCATTGCAACCTG
TAGGTGCAGAAATAGCAATTAAAGATGATCAACAATTTTCTGTATTAGATCAAACTATCACAGTAAAAAAACCTGAAAAT
TCGACAAAAAAATATGTGCGTCAAGTGATATCACAAACCATTGCCTTGCGTAATGTGATCGGGGAGCGTGGTGAATGA

Domains

Predicted by InterProScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (1-26)

• Type IV Pilus-assembly protein W (PilW) (197-338)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilW	Acinetobacter baumannii D1279779	39.889	100	0.417