Detailed information NTG0534637

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: JQN69_RS16875
• Genome accession: NZ_CP069430
• Coordinates: 3443824..3444987 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain TB918
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3438824..3449987

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JQN69_RS16845 (JQN69_16845)	-	3439088..3439507 (-)	420	WP_012118571.1	TIGR03826 family flagellar region protein	-
JQN69_RS16850 (JQN69_16850)	comFC	3439581..3440270 (-)	690	WP_197200179.1	double zinc ribbon domain-containing protein	Machinery gene
JQN69_RS16855 (JQN69_16855)	-	3440276..3440560 (-)	285	WP_007407481.1	competence protein ComFB	-
JQN69_RS16860 (JQN69_16860)	comFA	3440618..3442003 (-)	1386	WP_099320008.1	DEAD/DEAH box helicase	Machinery gene
JQN69_RS16865 (JQN69_16865)	-	3442112..3442960 (-)	849	WP_094031329.1	DegV family protein	-
JQN69_RS16870 (JQN69_16870)	degU	3443058..3443747 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
JQN69_RS16875 (JQN69_16875)	degS	3443824..3444987 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
JQN69_RS16880 (JQN69_16880)	-	3445210..3445857 (+)	648	WP_007407485.1	YigZ family protein	-
JQN69_RS16885 (JQN69_16885)	-	3445862..3447097 (+)	1236	WP_025285355.1	LCP family protein	-
JQN69_RS16890 (JQN69_16890)	-	3447196..3448272 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
JQN69_RS16895 (JQN69_16895)	-	3448405..3449601 (-)	1197	WP_094031330.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=534637 JQN69_RS16875 WP_007407484.1 3443824..3444987(-) (degS) [Bacillus velezensis strain TB918]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=534637 JQN69_RS16875 WP_007407484.1 3443824..3444987(-) (degS) [Bacillus velezensis strain TB918]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTTAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951