Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   JQM34_RS08020 Genome accession   NZ_CP069427
Coordinates   1681638..1682261 (+) Length   207 a.a.
NCBI ID   WP_000240906.1    Uniprot ID   E9FEI1
Organism   Streptococcus oralis strain SF100     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 1676638..1687261
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JQM34_RS08010 (JQM34_0001632) rpoC 1677308..1680973 (+) 3666 WP_200370811.1 DNA-directed RNA polymerase subunit beta' -
  JQM34_RS08015 (JQM34_0001633) ndk 1681084..1681503 (+) 420 WP_000438281.1 nucleoside-diphosphate kinase -
  JQM34_RS08020 (JQM34_0001634) comM 1681638..1682261 (+) 624 WP_000240906.1 hypothetical protein Regulator
  JQM34_RS08025 (JQM34_0001635) tsaE 1682345..1682788 (+) 444 WP_200370819.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  JQM34_RS08030 (JQM34_0001636) - 1682778..1683299 (+) 522 WP_198459179.1 GNAT family N-acetyltransferase -
  JQM34_RS08035 (JQM34_0001637) - 1683304..1684344 (+) 1041 WP_200370821.1 LCP family protein -
  JQM34_RS08040 (JQM34_0001638) cinA 1684417..1685673 (+) 1257 WP_200370822.1 competence/damage-inducible protein A Machinery gene
  JQM34_RS08045 (JQM34_0001639) recA 1685728..1686879 (+) 1152 WP_001085517.1 recombinase RecA Machinery gene
  JQM34_RS08050 (JQM34_0001640) - 1687049..1687243 (+) 195 WP_000415528.1 PspC domain-containing protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23684.65 Da        Isoelectric Point: 9.2521

>NTDB_id=534557 JQM34_RS08020 WP_000240906.1 1681638..1682261(+) (comM) [Streptococcus oralis strain SF100]
MVKSIRLLLLIAVIQISFSSCLLWKESFLSLKQTNAYFLILIVGISVLCAGINYFHTADQSRHSILHVQKKVSLVYCLLL
VVNLLATCLVLSESIQTTSKLQQELVDLFLPSFFFLLGVDLLIFLPFDKIFRDIENHLNKKKTVVISVLATMVFLRNPIV
ISSILLYISVGFLCARFLFPKCIQREISFYGHLIRDILFVFSIVVFF

Nucleotide


Download         Length: 624 bp        

>NTDB_id=534557 JQM34_RS08020 WP_000240906.1 1681638..1682261(+) (comM) [Streptococcus oralis strain SF100]
ATGGTAAAATCAATTCGCCTATTGTTGTTGATTGCAGTCATCCAGATTAGTTTTAGTAGTTGTCTATTATGGAAAGAATC
CTTTTTATCTTTAAAACAGACCAATGCTTATTTTTTGATTTTGATAGTAGGAATTTCTGTTCTTTGTGCTGGGATAAATT
ATTTCCATACAGCAGACCAGTCTAGACATAGTATTTTACATGTTCAAAAGAAAGTGAGTCTTGTTTATTGCCTCCTTTTA
GTAGTCAATCTTCTGGCAACCTGTCTGGTTCTCTCAGAAAGCATCCAAACCACTAGCAAATTGCAGCAGGAATTGGTTGA
CCTCTTTTTACCCTCCTTCTTTTTCTTGCTAGGAGTAGATCTATTGATTTTCTTACCTTTTGATAAAATTTTTCGCGATA
TAGAAAATCACCTAAATAAAAAGAAAACAGTCGTCATTTCCGTTCTAGCTACGATGGTTTTCTTGAGGAACCCCATAGTG
ATTTCCTCGATTCTCCTTTATATCAGTGTTGGTTTTCTATGCGCACGTTTCCTTTTTCCAAAATGTATTCAAAGGGAAAT
CTCCTTTTATGGACACCTGATTCGGGATATCTTGTTTGTTTTTTCAATAGTTGTATTCTTTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB E9FEI1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

51.456

99.517

0.512
  comM Streptococcus pneumoniae R6

51.456

99.517

0.512
  comM Streptococcus pneumoniae TIGR4

51.456

99.517

0.512
  comM Streptococcus mitis NCTC 12261

40.609

95.169

0.386
  comM Streptococcus mitis SK321

40.609

95.169

0.386