Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   KBP30_RS18650 Genome accession   NZ_CP084203
Coordinates   4435233..4436357 (+) Length   374 a.a.
NCBI ID   WP_189303628.1    Uniprot ID   -
Organism   Streptomyces sp. Go40/10 strain Go 40/10     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4430233..4441357
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KBP30_RS18635 (KBP30_18630) - 4430333..4431190 (+) 858 WP_230919772.1 hypothetical protein -
  KBP30_RS18640 (KBP30_18635) - 4431408..4433501 (-) 2094 WP_305809401.1 hypothetical protein -
  KBP30_RS18645 (KBP30_18640) radA/sms 4433743..4435152 (+) 1410 WP_189303630.1 DNA repair protein RadA Machinery gene
  KBP30_RS18650 (KBP30_18645) disA 4435233..4436357 (+) 1125 WP_189303628.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  KBP30_RS18655 (KBP30_18650) - 4436475..4437311 (-) 837 WP_230919774.1 hypothetical protein -
  KBP30_RS18660 (KBP30_18655) - 4437492..4438367 (+) 876 WP_230919775.1 A/G-specific adenine glycosylase -
  KBP30_RS18665 (KBP30_18660) - 4438644..4439183 (+) 540 WP_055703482.1 SigE family RNA polymerase sigma factor -
  KBP30_RS18670 (KBP30_18665) - 4439225..4439824 (+) 600 WP_230919776.1 hypothetical protein -
  KBP30_RS18675 (KBP30_18670) cseB 4439949..4440653 (+) 705 WP_230919777.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40061.78 Da        Isoelectric Point: 5.0092

>NTDB_id=534447 KBP30_RS18650 WP_189303628.1 4435233..4436357(+) (disA) [Streptomyces sp. Go40/10 strain Go 40/10]
MAANDRAAAPGKSGGSAGSDRLMRASLSAVAPGTALRDGLERVLRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQFVPDATIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLEELIA
GVEPDRELVVRDYVPEPTAKRSRTVEEALAELDALTHAELLELGTVARALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=534447 KBP30_RS18650 WP_189303628.1 4435233..4436357(+) (disA) [Streptomyces sp. Go40/10 strain Go 40/10]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGTGCCGGTTCCGATCGCCTGATGCGCGCCTCGCT
GAGCGCCGTGGCTCCCGGTACGGCCCTGCGGGACGGCCTGGAGCGGGTCCTGCGCGGCAACACCGGCGGGCTCATCGTGC
TCGGCTCCGACAAGACGGTCGAGGCGATGTGCACGGGCGGTTTCGTGCTGGACGTCGAGTTCACCGCGACCCGGCTGCGG
GAGCTGTGCAAGCTGGACGGCGGCATCGTGCTGTCGTCGGACCTGTCGAAGATCCTCCGGGCGGGCGTGCAGTTCGTGCC
GGACGCGACCATCCCCACGGAGGAGACGGGCACGCGGCACCGCACGGCGGACCGGGTCTCCAAGCAGGTCGGCTTCCCGG
TCGTCTCGGTCTCCCAGTCGATGCGGCTGATCGCGCTCTACGTCGACGGGCAGCGCCGTGTCCTGGAGGACTCGGCGGCG
ATCCTCTCCCGCGCGAACCAGGCGCTGGCGACGCTGGAGCGGTACAAGCTCCGGCTGGACGAGGTCGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGTCGGCGGTCGCGCAGCGGCTGGAGATGGTCCGCCGCATCG
CCACCGAGATCGCCGAGTACGTGGTCGAGCTGGGCACGGACGGCCGGCTTCTCGCGCTCCAGCTGGAGGAGTTGATCGCC
GGGGTCGAGCCCGACCGCGAGCTGGTGGTCCGGGACTACGTGCCCGAGCCGACGGCCAAGCGGTCCCGCACGGTCGAGGA
GGCGCTGGCCGAGCTGGACGCGCTGACCCATGCGGAGCTTCTCGAACTCGGCACGGTGGCGCGTGCGCTGGGTTACACCG
GGTCCCCGGAGACGCTCGACTCCGCGGTGTCCCCGCGGGGCTTCCGGCTCCTGGCCAAGGTCCCGCGTCTTCCGGGCGCC
ATCATCGACCGGCTGGTGGAGCACTTCGGGGGCCTGCAGAAGCTGCTGGCCGCGAGTGTGGACGACCTGCAGACCGTGGA
CGGGGTCGGCGAGGCCCGGGCGAGGAGCGTGCGGGAGGGGCTGTCCCGCCTGGCCGAGTCGTCGATCCTGGAGCGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.532

92.513

0.43