Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | U722_RS08115 | Genome accession | NC_023073 |
| Coordinates | 1663093..1663455 (+) | Length | 120 a.a. |
| NCBI ID | WP_003154238.1 | Uniprot ID | A0A150FA43 |
| Organism | Bacillus amyloliquefaciens LFB112 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1658093..1668455
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U722_RS08085 (U722_08535) | flgD | 1658996..1659436 (+) | 441 | WP_003154247.1 | flagellar hook assembly protein FlgD | - |
| U722_RS08090 (U722_08540) | flgG | 1659461..1660237 (+) | 777 | WP_003154244.1 | flagellar basal body rod protein FlgG | - |
| U722_RS08095 (U722_08545) | - | 1660277..1660492 (+) | 216 | WP_003154243.1 | flagellar FlbD family protein | - |
| U722_RS08100 (U722_08550) | fliL | 1660489..1660908 (+) | 420 | WP_003154241.1 | flagellar basal body-associated protein FliL | - |
| U722_RS08105 (U722_08555) | fliM | 1660942..1661940 (+) | 999 | WP_003154240.1 | flagellar motor switch protein FliM | - |
| U722_RS08110 (U722_08560) | fliY | 1661930..1663066 (+) | 1137 | WP_003154239.1 | flagellar motor switch phosphatase FliY | - |
| U722_RS08115 (U722_08565) | pilH | 1663093..1663455 (+) | 363 | WP_003154238.1 | chemotaxis protein CheY | Machinery gene |
| U722_RS08120 (U722_08570) | fliZ | 1663470..1664123 (+) | 654 | WP_003154237.1 | flagella biosynthesis regulatory protein FliZ | - |
| U722_RS08125 (U722_08575) | fliP | 1664116..1664781 (+) | 666 | WP_003154235.1 | flagellar type III secretion system pore protein FliP | - |
| U722_RS08130 (U722_08580) | fliQ | 1664796..1665065 (+) | 270 | WP_003154234.1 | flagellar biosynthesis protein FliQ | - |
| U722_RS08135 (U722_08585) | fliR | 1665072..1665851 (+) | 780 | WP_003154233.1 | flagellar biosynthetic protein FliR | - |
| U722_RS08140 (U722_08590) | flhB | 1665851..1666930 (+) | 1080 | WP_003154232.1 | flagellar biosynthesis protein FlhB | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13209.53 Da Isoelectric Point: 4.6805
>NTDB_id=53358 U722_RS08115 WP_003154238.1 1663093..1663455(+) (pilH) [Bacillus amyloliquefaciens LFB112]
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
Nucleotide
Download Length: 363 bp
>NTDB_id=53358 U722_RS08115 WP_003154238.1 1663093..1663455(+) (pilH) [Bacillus amyloliquefaciens LFB112]
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAGGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCAGACGGAGCGCAGGCAGTTGAAAAATTCAAAGAGCATTCCCCCGACCTAGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACAGCTCTAAAGGAAATTAAACAGATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGCCAGCAGTCAATGGTTATTGACGCGATTCAGGCCGGCGCAAAAGACTTTATCGTGAAACCGTTCCA
AGCGGACCGCGTGCTTGAAGCCATTAATAAAACATTAAGCTAA
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAGGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCAGACGGAGCGCAGGCAGTTGAAAAATTCAAAGAGCATTCCCCCGACCTAGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACAGCTCTAAAGGAAATTAAACAGATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGCCAGCAGTCAATGGTTATTGACGCGATTCAGGCCGGCGCAAAAGACTTTATCGTGAAACCGTTCCA
AGCGGACCGCGTGCTTGAAGCCATTAATAAAACATTAAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
38.983 |
98.333 |
0.383 |