Detailed information NTG0532935

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: LA346_RS05175
• Genome accession: NZ_CP083627
• Coordinates: 963637..964530 (+)
• Length: 297 a.a.
• NCBI ID: WP_000343888.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain FDAARGOS_1508
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 958637..969530

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LA346_RS05140 (LA346_05140)	-	958950..960119 (+)	1170	WP_000366345.1	pyridoxal phosphate-dependent aminotransferase	-
LA346_RS05145 (LA346_05145)	recO	960116..960886 (+)	771	WP_000616167.1	DNA repair protein RecO	Machinery gene
LA346_RS05150 (LA346_05150)	plsX	960883..961875 (+)	993	WP_000717453.1	phosphate acyltransferase PlsX	-
LA346_RS05155 (LA346_05155)	-	961881..962114 (+)	234	WP_000136447.1	acyl carrier protein	-
LA346_RS05160 (LA346_05160)	-	962151..962450 (+)	300	Protein_977	transposase family protein	-
LA346_RS05165 (LA346_05165)	blpU	962653..962883 (+)	231	WP_001093487.1	bacteriocin-like peptide BlpU	-
LA346_RS10840	-	962886..963011 (+)	126	WP_000346297.1	PncF family bacteriocin immunity protein	-
LA346_RS05170 (LA346_05170)	-	963422..963616 (+)	195	WP_000756776.1	hypothetical protein	-
LA346_RS05175 (LA346_05175)	comR	963637..964530 (+)	894	WP_000343888.1	XRE family transcriptional regulator	Regulator
LA346_RS05180 (LA346_05180)	-	965073..965369 (+)	297	WP_000837726.1	uberolysin/carnocyclin family circular bacteriocin	-
LA346_RS05185 (LA346_05185)	-	965376..966512 (+)	1137	WP_000698828.1	hypothetical protein	-
LA346_RS05190 (LA346_05190)	-	966509..966991 (+)	483	WP_001232094.1	stage II sporulation protein M	-
LA346_RS05195 (LA346_05195)	-	966988..967584 (+)	597	WP_000687787.1	ATP-binding cassette domain-containing protein	-
LA346_RS05200 (LA346_05200)	-	967565..968056 (+)	492	WP_000671990.1	hypothetical protein	-

Sequence

Protein

• Length: 297 a.a.
• Molecular weight: 34517.01 Da
• Isoelectric Point: 4.6498

>NTDB_id=532935 LA346_RS05175 WP_000343888.1 963637..964530(+) (comR) [Streptococcus pneumoniae strain FDAARGOS_1508]
MDELKREIGYKIKTIRRSCGKTQIDICGDESELTIRQLARIENGQALATLPKLLLIADKLGVSLQNIVDVKVIEIPKGFL
KLKDELIHSQTYADKGRIERKEAILEEIYENYYENLPEEEQLIVDVTQARFDIYGSSDVTYGLGLVEEYFQQLLKKKYFS
VNDLLIIELYFFCCAMGLEDKEHFEELAQKVLLCSEYEDKASLVQMEKVLLSLFIQIQTEDSLIYIQTFEKIIAKTRHVF
YRPHLFLLKAKYALFVDKNILEAESFYEKAISLAELLDDQVLVQRILAEKQIDFPTT

Nucleotide

• Length: 894 bp

>NTDB_id=532935 LA346_RS05175 WP_000343888.1 963637..964530(+) (comR) [Streptococcus pneumoniae strain FDAARGOS_1508]
ATGGATGAGTTGAAACGTGAAATTGGTTATAAAATCAAAACTATTAGGCGATCTTGTGGAAAAACTCAGATAGATATTTG
TGGTGATGAATCAGAGTTGACGATTCGTCAGCTAGCACGTATTGAAAATGGGCAAGCTTTAGCAACACTTCCTAAATTAT
TATTGATTGCGGATAAACTTGGAGTATCATTACAGAATATTGTGGATGTTAAGGTTATAGAGATTCCAAAAGGATTCCTA
AAACTCAAAGATGAGCTGATTCATTCTCAAACCTACGCTGATAAGGGAAGAATCGAACGAAAAGAAGCTATACTTGAGGA
AATATATGAAAACTATTATGAGAATTTGCCTGAGGAAGAGCAGTTAATTGTGGATGTGACACAAGCTCGTTTTGATATTT
ATGGTAGTTCAGATGTGACCTACGGTTTAGGGTTAGTGGAAGAATATTTCCAGCAGTTATTAAAAAAGAAATATTTTTCT
GTAAATGATTTGTTGATTATTGAATTGTATTTCTTTTGTTGTGCTATGGGATTAGAAGATAAAGAACATTTTGAGGAGTT
AGCTCAAAAAGTATTGCTATGTTCAGAATATGAAGATAAGGCTAGCCTAGTTCAAATGGAAAAAGTTCTTCTGAGCCTAT
TTATCCAAATTCAGACAGAAGATAGTCTGATATATATTCAAACATTTGAGAAAATTATTGCTAAAACAAGACATGTTTTT
TACCGACCTCATCTATTTTTGCTAAAGGCAAAATATGCTTTATTTGTAGACAAGAATATTTTAGAGGCAGAAAGTTTCTA
TGAAAAGGCGATTTCTCTAGCAGAATTGCTAGACGATCAGGTATTAGTTCAGAGAATTTTAGCAGAAAAACAGATAGATT
TCCCAACAACCTGA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (76-289)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	36.667	100	0.37