Detailed information NTG0532925

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: LA346_RS04770
• Genome accession: NZ_CP083627
• Coordinates: 893187..894284 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266661.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain FDAARGOS_1508
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 888187..899284

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LA346_RS04745 (LA346_04745)	pgsA	888708..889253 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
LA346_RS04750 (LA346_04750)	rodZ	889264..890085 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
LA346_RS04755 (LA346_04755)	yfmH	890127..891410 (-)	1284	WP_000170191.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
LA346_RS04760 (LA346_04760)	yfmF	891407..892657 (-)	1251	WP_000424269.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
LA346_RS04765 (LA346_04765)	-	892816..893184 (+)	369	WP_000455898.1	RNA-binding S4 domain-containing protein	-
LA346_RS04770 (LA346_04770)	recF	893187..894284 (+)	1098	WP_000266661.1	DNA replication/repair protein RecF	Machinery gene
LA346_RS04775 (LA346_04775)	guaB	894335..895813 (-)	1479	WP_000073428.1	IMP dehydrogenase	-
LA346_RS04780 (LA346_04780)	trpS	895965..896990 (-)	1026	WP_000165446.1	tryptophan--tRNA ligase	-
LA346_RS04785 (LA346_04785)	-	897196..898818 (+)	1623	WP_000958769.1	ABC-F family ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41999.13 Da
• Isoelectric Point: 9.3081

>NTDB_id=532925 LA346_RS04770 WP_000266661.1 893187..894284(+) (recF) [Streptococcus pneumoniae strain FDAARGOS_1508]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNRN

Nucleotide

• Length: 1098 bp

>NTDB_id=532925 LA346_RS04770 WP_000266661.1 893187..894284(+) (recF) [Streptococcus pneumoniae strain FDAARGOS_1508]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGCTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCGATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTGCTGTAAATAGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.452	100	0.995
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46