Detailed information NTG0532776

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: LA372_RS21905
• Genome accession: NZ_CP083585
• Coordinates: 4549286..4550311 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain ECNB21-M121
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4544286..4555311

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LA372_RS21885 (LA372_21900)	metJ	4545347..4545664 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
LA372_RS21890 (LA372_21905)	yiiX	4545848..4546456 (+)	609	WP_047623858.1	YiiX family permuted papain-like enzyme	-
LA372_RS21895 (LA372_21910)	rpmE	4546517..4546729 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
LA372_RS21900 (LA372_21915)	priA	4546932..4549130 (+)	2199	WP_047623859.1	primosomal protein N'	Machinery gene
LA372_RS21905 (LA372_21920)	cytR	4549286..4550311 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
LA372_RS21910 (LA372_21925)	ftsN	4550403..4551362 (+)	960	WP_000068837.1	cell division protein FtsN	-
LA372_RS21915 (LA372_21930)	hslV	4551455..4551985 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
LA372_RS21920 (LA372_21935)	hslU	4551995..4553326 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
LA372_RS21925 (LA372_21940)	menA	4553393..4554319 (+)	927	WP_047623860.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
LA372_RS21930 (LA372_21945)	rraA	4554412..4554897 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=532776 LA372_RS21905 WP_000644904.1 4549286..4550311(+) (cytR) [Escherichia coli strain ECNB21-M121]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=532776 LA372_RS21905 WP_000644904.1 4549286..4550311(+) (cytR) [Escherichia coli strain ECNB21-M121]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGCCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628