Detailed information NTG0532244

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: JN168_RS06585
• Genome accession: NZ_CP069082
• Coordinates: 1400288..1401262 (+)
• Length: 324 a.a.
• NCBI ID: WP_229367240.1
• Uniprot ID: -
• Organism: Staphylococcus gallinarum strain STP534
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1395288..1406262

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JN168_RS06550	rpmG	1395790..1395939 (+)	150	WP_042738581.1	50S ribosomal protein L33	-
JN168_RS06555	-	1396086..1396628 (+)	543	WP_042738582.1	5-formyltetrahydrofolate cyclo-ligase	-
JN168_RS06560	-	1396640..1398094 (+)	1455	WP_229367242.1	rhomboid family intramembrane serine protease	-
JN168_RS06565	-	1398084..1398281 (+)	198	WP_042739023.1	YqgQ family protein	-
JN168_RS06570	-	1398286..1399272 (+)	987	WP_279526248.1	ROK family glucokinase	-
JN168_RS06575	-	1399272..1399595 (+)	324	WP_042738585.1	MTH1187 family thiamine-binding protein	-
JN168_RS06580	-	1399597..1400220 (+)	624	WP_279526249.1	MBL fold metallo-hydrolase	-
JN168_RS06585	comGA	1400288..1401262 (+)	975	WP_229367240.1	competence type IV pilus ATPase ComGA	Machinery gene
JN168_RS06590	comGB	1401234..1402301 (+)	1068	WP_279526250.1	competence type IV pilus assembly protein ComGB	-
JN168_RS06595	comGC	1402321..1402638 (+)	318	WP_042738587.1	competence type IV pilus major pilin ComGC	Machinery gene
JN168_RS06600	comGD	1402616..1403062 (+)	447	WP_042738588.1	competence type IV pilus minor pilin ComGD	-
JN168_RS06605	-	1403320..1403760 (+)	441	WP_042738589.1	competence type IV pilus minor pilin ComGF	-
JN168_RS06610	-	1403967..1404440 (+)	474	WP_279526270.1	shikimate kinase	-
JN168_RS06615	gcvT	1404610..1405701 (+)	1092	WP_279526251.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37036.12 Da
• Isoelectric Point: 8.9083

>NTDB_id=532244 JN168_RS06585 WP_229367240.1 1400288..1401262(+) (comGA) [Staphylococcus gallinarum strain STP534]
MQLLFNNILGKALTRKASDIHFIPSDKEVILKFRINDQFIFIETIHQTLYQKLLTFMKYQAGLDVANHNTAQSGRYLYKF
KQLYYLRISTLPLSLGNESCVIRIIPQFFSEPKRSSELLDLYRLMNKKQGLILLSGPTGSGKSTLMYQLVKYAKDNLNLN
IITIEDPVETLIQGITQVSINEKAGINYASSFKAILRCDPDIILIGEIRDATIAKYVLQASLSGHLVLTTIHASNCKGTL
LRLLEMGCSAQEIQQSILAIVNQRLITTNKQDRLLIYETLSTADIEYFFNHEQKLPVNFESLHYKLQMMSKEGVIREEIL
DRYS

Nucleotide

• Length: 975 bp

>NTDB_id=532244 JN168_RS06585 WP_229367240.1 1400288..1401262(+) (comGA) [Staphylococcus gallinarum strain STP534]
TTGCAATTATTATTTAATAATATTTTAGGTAAAGCCCTAACAAGAAAAGCTTCAGATATTCATTTTATTCCTAGTGACAA
AGAGGTGATATTGAAGTTCAGAATTAATGACCAATTTATATTTATTGAAACGATACATCAGACGTTATATCAAAAGTTAC
TGACTTTCATGAAATATCAAGCTGGTCTTGATGTAGCAAACCATAATACAGCTCAAAGTGGTAGATATCTATATAAATTT
AAACAATTATATTATTTGAGGATTTCTACGCTCCCATTATCTTTAGGAAATGAAAGTTGTGTTATTCGTATTATTCCACA
ATTTTTTAGTGAACCTAAACGATCAAGTGAATTATTAGATTTATATAGGTTAATGAACAAGAAACAAGGTCTAATATTAT
TAAGTGGTCCTACTGGATCAGGAAAAAGCACCTTGATGTACCAATTAGTAAAGTATGCTAAAGATAATCTAAATTTAAAT
ATAATTACAATTGAAGATCCTGTCGAAACTTTAATTCAAGGTATAACACAAGTATCAATTAATGAAAAGGCAGGGATAAA
CTATGCCTCTTCATTTAAAGCTATTTTACGTTGTGATCCAGATATAATTCTAATTGGAGAAATAAGAGATGCGACGATTG
CAAAGTATGTACTTCAAGCTAGTCTTAGTGGTCATTTAGTGCTTACAACAATTCATGCTAGTAATTGTAAGGGTACATTA
TTAAGGTTGCTAGAAATGGGGTGCAGTGCTCAAGAAATACAACAGTCTATATTAGCAATCGTCAATCAACGACTTATTAC
AACAAATAAACAAGATAGGTTACTAATATATGAAACTTTGTCTACTGCAGATATTGAATATTTTTTCAATCATGAACAAA
AGTTACCTGTAAATTTTGAAAGTCTCCATTATAAACTACAAATGATGTCCAAAGAAGGTGTGATTCGTGAAGAAATACTT
GATCGCTATAGTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	61.92	99.691	0.617
comGA	Staphylococcus aureus N315	61.92	99.691	0.617