Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   JOA01_RS09820 Genome accession   NZ_CP069079
Coordinates   1931332..1932090 (+) Length   252 a.a.
NCBI ID   WP_217374445.1    Uniprot ID   -
Organism   Streptococcus parasuis strain BS26     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1926332..1937090
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JOA01_RS09805 (JOA01_09810) - 1928668..1929330 (-) 663 WP_254451613.1 YoaK family protein -
  JOA01_RS09810 (JOA01_09815) rlmH 1929358..1929837 (-) 480 WP_130554909.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  JOA01_RS09815 (JOA01_09820) htrA 1930088..1931269 (+) 1182 WP_217374443.1 S1C family serine protease Regulator
  JOA01_RS09820 (JOA01_09825) spo0J 1931332..1932090 (+) 759 WP_217374445.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 28981.40 Da        Isoelectric Point: 9.1516

>NTDB_id=532199 JOA01_RS09820 WP_217374445.1 1931332..1932090(+) (spo0J) [Streptococcus parasuis strain BS26]
MEELHYLKIKDIQANPYQPRLHFDEEKLLELAQSIKENGVIQPIIVRRSPLIGFELLAGERRLRASQLAGLTEIPAVIKH
LSDDDLLYQAIIENLQRSDLNPIEEAHSYEKLIEKGLTHDEIAQIMGKSRPYITNLLRLLHLSESTRQAVETGKITQGHA
RQLVALSEKQQAEWVQKIQEKDISVRKLETILSSKKKKTIRKSNQFISEEEEKLAKLLGTKVTIQQKKNGSGQLTIHFQN
IEEFERIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=532199 JOA01_RS09820 WP_217374445.1 1931332..1932090(+) (spo0J) [Streptococcus parasuis strain BS26]
ATGGAAGAACTACACTATCTCAAAATAAAAGACATTCAGGCCAATCCCTATCAACCAAGATTGCATTTTGATGAAGAAAA
ATTATTGGAATTAGCTCAATCTATCAAAGAAAATGGCGTCATTCAACCTATTATTGTTCGCAGATCACCGCTGATTGGTT
TTGAGTTACTTGCTGGTGAAAGACGATTAAGAGCTAGTCAACTAGCGGGATTAACAGAGATTCCAGCAGTCATCAAGCAT
CTATCTGATGATGATTTGCTCTACCAAGCTATCATAGAAAACTTACAACGCTCTGACCTCAATCCTATTGAAGAGGCTCA
TTCCTACGAAAAGTTGATAGAAAAAGGCTTAACACATGATGAGATTGCTCAAATCATGGGAAAATCACGACCATATATCA
CTAATCTTCTTCGTTTACTCCATTTATCCGAATCTACGAGGCAAGCAGTAGAAACAGGAAAAATCACACAAGGGCATGCT
AGACAGCTAGTAGCACTATCAGAGAAACAACAAGCAGAATGGGTTCAAAAAATCCAAGAAAAGGATATCAGCGTACGAAA
ATTAGAAACAATACTATCCTCTAAAAAGAAAAAAACAATTAGAAAATCCAACCAATTTATTTCAGAAGAAGAAGAGAAAT
TAGCAAAACTACTTGGAACCAAAGTAACAATCCAACAAAAGAAAAATGGATCGGGACAACTGACTATTCACTTTCAAAAC
ATCGAAGAATTTGAAAGAATTATCAACAGTCTGAAATAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(145-191)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

55.118

100

0.556