Detailed information NTG0532064

Bioinformatically predicted

Overview

• Name: uvrB
• Type: Machinery gene
• Locus tag: LAE74_RS07905
• Genome accession: NZ_CP083395
• Coordinates: 1488212..1490185 (+)
• Length: 657 a.a.
• NCBI ID: WP_057037150.1
• Uniprot ID: -
• Organism: Campylobacter coli strain C203018
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1483212..1495185

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LAE74_RS07875 (LAE74_07845)	flgH	1483400..1484098 (+)	699	WP_002787400.1	flagellar basal body L-ring protein FlgH	-
LAE74_RS07880 (LAE74_07850)	ispG	1484182..1485255 (-)	1074	WP_002776443.1	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	-
LAE74_RS07885 (LAE74_07855)	-	1485315..1487153 (-)	1839	WP_002776439.1	primosomal protein N'	-
LAE74_RS07890 (LAE74_07860)	Cj0683	1487150..1487596 (-)	447	WP_002776437.1	type II secretion system protein	Machinery gene
LAE74_RS07895 (LAE74_07865)	-	1487593..1487838 (-)	246	WP_002776428.1	hypothetical protein	-
LAE74_RS07900 (LAE74_07870)	-	1487828..1488058 (-)	231	WP_002776426.1	hypothetical protein	-
LAE74_RS07905 (LAE74_07875)	uvrB	1488212..1490185 (+)	1974	WP_057037150.1	excinuclease ABC subunit UvrB	Machinery gene
LAE74_RS07910 (LAE74_07880)	-	1490220..1491644 (-)	1425	WP_002776421.1	anaerobic C4-dicarboxylate transporter	-
LAE74_RS07915 (LAE74_07885)	-	1491831..1493081 (-)	1251	WP_002776420.1	RNA polymerase factor sigma-54	-
LAE74_RS07920 (LAE74_07890)	lptB	1493081..1493809 (-)	729	WP_002776419.1	LPS export ABC transporter ATP-binding protein	-
LAE74_RS07925 (LAE74_07895)	tsaE	1493802..1494209 (-)	408	WP_057037151.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	-
LAE74_RS07930 (LAE74_07900)	-	1494206..1494451 (-)	246	WP_002776417.1	RNA-binding S4 domain-containing protein	-

Sequence

Protein

• Length: 657 a.a.
• Molecular weight: 75997.40 Da
• Isoelectric Point: 6.4586

>NTDB_id=532064 LAE74_RS07905 WP_057037150.1 1488212..1490185(+) (uvrB) [Campylobacter coli strain C203018]
MLELTSDFKPSPDQEQAIQGIVKSIKKGNKYQTLLGVTGSGKTFTMANVIKELNMPTLIMSHNKSLCAQLYSEFKGFFSK
NHVEYFISYYDYYQPEAYIPRTDVFIEKDSSTNEDLERLRLSATASLLSYEDVVCIASVSANYGLGNPNEYIGMVLIFEL
DMQISQKELLKKLVDMGYKRNDNFFDRADFRVQGDIIDIYPAYYEDEVVRLEFFGDELDAMYHYNVLENKKGKDLKRFIL
YPTSQFSVGETRLKQAIKDIKAELNERLAYFEHENKLVEYQRLKQRVEFDLEMLASTGMCKGVENYARHLTGLKEGDTPY
TLFDYFAIKNRKFLVIVDESHVSLPQFRGMFAGDRSRKQTLVDYGFRLPSALDNRPLMFDEFIHKDCQFLFVSATPAPLE
LELSKENIFHQIMRPTGLLDPLIELKDSDNQVEILFDEAKKVIQRNERVLVTVLTKKLAEELTRYYLELGIKVKYMHSDI
DAIERNEIIRGLRSGAFDMLIGINLLREGLDLPEVSLIAIMDADKEGFLRSTTSLIQTMGRAARNVNGKVLLFCKKITKS
MQEAMDTTNERRKLQEAYNQKHNITPTSVKRHIEESLKNEENLGEIYRKGKKIEKMPANERTKIVKELRKQMLEAAKALE
FEKAATLRDEINKLKDL

Nucleotide

• Length: 1974 bp

>NTDB_id=532064 LAE74_RS07905 WP_057037150.1 1488212..1490185(+) (uvrB) [Campylobacter coli strain C203018]
ATGTTAGAACTTACAAGCGATTTTAAACCAAGTCCTGATCAAGAACAAGCAATACAAGGTATTGTCAAAAGCATAAAAAA
AGGTAATAAATATCAAACCCTACTCGGCGTAACAGGAAGCGGAAAGACTTTTACCATGGCAAATGTCATAAAAGAACTCA
ATATGCCAACCCTTATCATGAGTCATAACAAAAGCCTTTGCGCCCAGCTTTATAGCGAATTTAAAGGTTTTTTTTCTAAG
AACCATGTGGAATATTTTATTTCTTATTATGATTATTATCAGCCTGAAGCTTATATACCGCGCACCGATGTTTTTATAGA
AAAAGATAGCTCCACAAATGAGGATCTAGAACGCTTAAGACTTAGCGCAACTGCTTCGCTTTTAAGCTATGAGGATGTGG
TTTGTATCGCTAGTGTCTCGGCTAATTATGGACTTGGAAATCCAAATGAATACATAGGAATGGTTTTAATCTTTGAACTA
GACATGCAAATTTCACAAAAAGAACTTTTAAAGAAACTTGTAGACATGGGTTATAAAAGAAATGATAATTTCTTTGATCG
TGCTGATTTTCGCGTACAAGGTGATATTATAGATATTTATCCTGCTTATTACGAAGATGAAGTAGTAAGACTTGAATTTT
TTGGTGATGAACTGGATGCAATGTATCATTATAATGTTTTAGAAAATAAAAAAGGCAAAGATTTAAAACGCTTCATACTT
TATCCTACAAGCCAGTTTAGTGTAGGTGAAACAAGACTAAAACAAGCGATAAAAGACATAAAAGCAGAACTTAACGAACG
CCTTGCTTATTTTGAACATGAAAATAAACTCGTAGAATACCAACGCCTTAAACAACGCGTTGAATTTGATCTTGAAATGC
TTGCAAGCACAGGGATGTGCAAAGGGGTTGAAAACTATGCTAGACATTTAACAGGGCTTAAAGAAGGCGATACGCCTTAT
ACACTTTTTGATTATTTTGCTATTAAAAATAGGAAATTTCTTGTTATTGTAGACGAAAGCCATGTTTCTTTACCACAATT
TCGCGGTATGTTTGCAGGAGATAGAAGTAGAAAGCAAACTTTAGTAGATTATGGTTTTCGTCTTCCATCAGCTCTTGATA
ATCGTCCTTTAATGTTTGATGAATTTATCCATAAAGATTGTCAGTTTCTTTTTGTTTCAGCCACCCCTGCCCCGCTTGAG
CTTGAACTTAGCAAGGAAAATATCTTTCATCAAATTATGCGTCCAACAGGATTACTTGATCCTTTGATAGAACTTAAAGA
TAGCGATAATCAAGTTGAAATTTTATTTGATGAAGCCAAAAAAGTTATACAAAGAAACGAACGCGTTTTAGTTACTGTGT
TGACTAAAAAACTAGCTGAAGAGCTTACAAGGTATTATTTAGAACTTGGTATTAAAGTAAAATACATGCATTCAGATATT
GATGCAATAGAACGCAATGAAATCATAAGAGGCTTAAGAAGCGGTGCTTTTGATATGTTAATAGGTATAAATTTACTTAG
AGAAGGACTTGATTTGCCTGAGGTTTCGCTTATTGCCATTATGGACGCAGATAAGGAGGGTTTTTTAAGAAGCACTACAA
GTTTAATCCAAACCATGGGAAGAGCTGCTAGAAATGTCAATGGTAAAGTTTTACTCTTTTGCAAAAAGATTACAAAATCC
ATGCAAGAAGCTATGGATACTACAAATGAGCGTCGCAAACTTCAAGAAGCTTACAATCAAAAACATAACATCACCCCAAC
TTCAGTCAAGCGACACATCGAAGAAAGTTTAAAAAATGAAGAAAACTTAGGAGAAATTTATCGCAAAGGTAAAAAAATTG
AAAAAATGCCTGCTAATGAAAGAACTAAAATCGTAAAAGAGCTTCGTAAACAAATGCTTGAAGCTGCTAAAGCGCTCGAA
TTTGAAAAAGCAGCGACTTTAAGAGATGAGATCAATAAATTAAAAGATTTATAG

Domains

Predicted by InterProScan.

• UvrB/uvrC motif (UVR) (623-656)

• Type III restriction enzyme, res subunit (ResIII) (8-116)

• Ultra-violet resistance protein B (UvrB) (552-593)

• Helicase conserved C-terminal domain (Helicase_C) (439-544)

• UvrB interaction domain (UvrB_inter) (158-246)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrB	Streptococcus pneumoniae TIGR4	50.457	99.848	0.504
uvrB	Streptococcus pneumoniae R6	50.457	99.848	0.504
uvrB	Streptococcus pneumoniae D39	50.457	99.848	0.504