Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   JNE45_RS05560 Genome accession   NZ_CP069061
Coordinates   1124127..1124324 (+) Length   65 a.a.
NCBI ID   WP_024425054.1    Uniprot ID   A0AAX0Z5U3
Organism   Bacillus safensis strain F6     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1119127..1129324
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JNE45_RS05530 (JNE45_05530) - 1119531..1119710 (+) 180 WP_008348517.1 YjzC family protein -
  JNE45_RS05535 (JNE45_05535) - 1119884..1121149 (+) 1266 WP_144470143.1 MFS transporter -
  JNE45_RS05540 (JNE45_05540) - 1121264..1121458 (-) 195 WP_003211779.1 YjzD family protein -
  JNE45_RS05545 (JNE45_05545) - 1121671..1122411 (+) 741 WP_048238467.1 hypothetical protein -
  JNE45_RS05550 (JNE45_05550) - 1122485..1123060 (+) 576 WP_095408187.1 nad binding enzyme -
  JNE45_RS05555 (JNE45_05555) med 1123152..1124114 (+) 963 WP_144470145.1 BMP family ABC transporter substrate-binding protein Regulator
  JNE45_RS05560 (JNE45_05560) comZ 1124127..1124324 (+) 198 WP_024425054.1 ComZ family protein Regulator
  JNE45_RS05565 (JNE45_05565) - 1124335..1124568 (-) 234 WP_144470147.1 hypothetical protein -
  JNE45_RS05570 (JNE45_05570) - 1124740..1125678 (+) 939 WP_203129581.1 beta-ketoacyl-ACP synthase III -
  JNE45_RS05575 (JNE45_05575) fabF 1125700..1126941 (+) 1242 WP_034282078.1 beta-ketoacyl-ACP synthase II -
  JNE45_RS05580 (JNE45_05580) - 1127019..1127822 (+) 804 WP_203129583.1 DUF2268 domain-containing protein -
  JNE45_RS05585 (JNE45_05585) - 1127972..1128952 (+) 981 WP_203129585.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7405.45 Da        Isoelectric Point: 4.1652

>NTDB_id=532035 JNE45_RS05560 WP_024425054.1 1124127..1124324(+) (comZ) [Bacillus safensis strain F6]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLEPEALQPLLTLFTSVMQEAYELGKADAESEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=532035 JNE45_RS05560 WP_024425054.1 1124127..1124324(+) (comZ) [Bacillus safensis strain F6]
ATGCAGCACGAAAAATCGATGGAATTTTTACAAATTGCCATGAAGTATTTTCCGCAGGCGAAGGAAGAGTTAGATAAAGC
AGGGATTCAGCTTGAGCCTGAAGCACTTCAGCCGCTTCTAACATTATTTACATCTGTCATGCAGGAAGCATACGAGCTTG
GAAAAGCGGATGCAGAATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

72.131

93.846

0.677