Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | JNE45_RS00585 | Genome accession | NZ_CP069061 |
| Coordinates | 107017..109452 (+) | Length | 811 a.a. |
| NCBI ID | WP_048240170.1 | Uniprot ID | - |
| Organism | Bacillus safensis strain F6 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 102017..114452
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNE45_RS00570 (JNE45_00570) | - | 104888..105352 (+) | 465 | WP_003217184.1 | CtsR family transcriptional regulator | - |
| JNE45_RS00575 (JNE45_00575) | - | 105367..105924 (+) | 558 | WP_203129122.1 | UvrB/UvrC motif-containing protein | - |
| JNE45_RS00580 (JNE45_00580) | - | 105929..107020 (+) | 1092 | WP_203129124.1 | protein arginine kinase | - |
| JNE45_RS00585 (JNE45_00585) | clpC | 107017..109452 (+) | 2436 | WP_048240170.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| JNE45_RS00590 (JNE45_00590) | radA | 109546..110925 (+) | 1380 | WP_203129126.1 | DNA repair protein RadA | Machinery gene |
| JNE45_RS00595 (JNE45_00595) | disA | 110928..112007 (+) | 1080 | WP_024425581.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| JNE45_RS00600 (JNE45_00600) | - | 112161..113261 (+) | 1101 | WP_095407564.1 | PIN/TRAM domain-containing protein | - |
| JNE45_RS00605 (JNE45_00605) | ispD | 113275..113964 (+) | 690 | WP_003217158.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| JNE45_RS00610 (JNE45_00610) | ispF | 113968..114444 (+) | 477 | WP_003216928.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 89995.73 Da Isoelectric Point: 6.2469
>NTDB_id=532023 JNE45_RS00585 WP_048240170.1 107017..109452(+) (clpC) [Bacillus safensis strain F6]
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDEGQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQHIVLDVEDG
EIVVKATAATN
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDEGQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQHIVLDVEDG
EIVVKATAATN
Nucleotide
Download Length: 2436 bp
>NTDB_id=532023 JNE45_RS00585 WP_048240170.1 107017..109452(+) (clpC) [Bacillus safensis strain F6]
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTAGGCCATAA
GAATATTGGTACTGAGCACATTTTACTTGGCCTTGTACGTGAAGGTGAGGGCATCGCTGCCAAAGCGTTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAAAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCTATTCCTCAT
TATACGCCTAGAGCGAAGAAGGTCACTGAGCTTTCAATGGATGAAGCAAGAAAGCTAGGTCATTCCTATGTAGGGACAGA
ACACATTCTATTAGGTCTTATTCGTGAGGGAGAGGGTGTCGCTGCCCGTGTCTTAAATAACCTCGGAGTGAGCTTAAATA
AAGCACGTCAGCAAGTCCTGCAGCTGCTTGGAAGCAATGAAACAGGTGCATCTGCGGCCGGCTCTAATAGCAATGCAAAT
ACACCAACACTAGATAGCTTGGCAAGAGATTTGACAGCTATCGCAAAAGAGGACAGCTTGGACCCTGTCATTGGCCGAAG
CAAAGAAATTCAACGTGTCATTGAGGTCCTAAGTAGAAGAACAAAAAATAACCCTGTGTTGATTGGTGAGCCTGGTGTTG
GTAAAACAGCCATTGCAGAAGGTCTTGCACAGCAAATTATTCATAATGAAGTACCTGAAATCCTGCGTGATAAACGAGTG
ATGACACTAGATATGGGAACAGTTGTAGCTGGTACGAAATATCGTGGTGAATTCGAGGATCGTTTGAAAAAAGTGATGGA
CGAAATTCGTCAGGCAGGAAATATCATTCTCTTTATCGATGAGCTTCATACGCTCATTGGTGCTGGTGGAGCAGAGGGTG
CAATTGATGCATCTAATATCTTGAAGCCATCCTTAGCACGTGGAGAGCTTCAATGTATTGGAGCGACAACGTTAGATGAG
TACCGTAAATATATTGAAAAGGATGCTGCGCTTGAACGACGTTTCCAGCCAATTCAAGTCGATCAGCCGTCTGTTGATGA
AAGTATTCAAATCTTAAGAGGGCTTAGAGACCGGTATGAAGCACATCACCGTGTGTCCATTACAGATGAAGCAATTGAGG
CGGCAGTGAAGCTGTCTGACCGTTATATTTCTGATCGTTTCCTTCCAGATAAGGCGATTGATTTAATTGATGAGGCAGGT
TCGAAAGTCCGTTTACGTTCGTTCACAACACCGCCTAACCTAAAAGAATTAGAGCAAAAGCTGGATGAAGTACGCAAGGA
AAAGGATGCAGCAGTTCAAAGTCAAGAATTTGAAAAAGCAGCTTCTCTTCGCGATACAGAGCAGCGTTTGCGTGAAAAAG
TAGAAGTCACAAAGAAATCATGGAAAGAAAAGCAGGGACAAGAGAATTCAGAGGTATCTGTAGATGATATTGCAATGGTC
GTTTCCAGCTGGACGGGAGTTCCTGTTTCGAAAATTGCTCAAACGGAGACAGATAAGCTTCTGAATATGGAACAATTGCT
CCACTCTCGTGTGATCGGGCAGGATGAAGCCGTTGTCGCTGTAGCGAAAGCTGTGAGACGTGCACGTGCTGGCCTGAAAG
ATCCGAAGCGTCCAATCGGCTCCTTTATCTTCTTAGGACCAACAGGGGTCGGTAAAACAGAGCTTGCAAGAGCACTCGCT
GAGTCTATTTTCGGTGATGAAGAAGCAATGATCCGTATTGATATGTCTGAATACATGGAGAAACACTCTACATCCAGACT
TGTCGGATCACCGCCAGGCTATGTCGGCTATGATGAAGGTGGACAGCTGACTGAAAAAGTGAGAAGAAAACCTTATTCTG
TCGTTCTTTTAGACGAGATTGAAAAGGCGCATCCAGATGTATTTAATATCTTACTGCAAGTGTTAGAAGATGGTCGTCTG
ACTGATTCTAAAGGACGTACCGTTGACTTTAGAAATACGATTTTGATCATGACATCAAACGTTGGAGCTAGTGAGCTGAA
GCGCAATAAATATGTTGGCTTTAACGTGCAGGATGAAGGTCAAAATTACAAGGATATGAAAGGCAAAGTGATGGGCGAGC
TGAAACGTGCGTTTAGACCTGAGTTTATCAACCGTATTGATGAAATCATTGTCTTCCACTCGCTTGAGAAGAAACATCTA
AAAGAGATCGTGTCTCTCATGTCTGATCAATTGACAAAACGATTAAAAGAACAAGACCTATCAATTGAATTGACGGAAGC
AGCAAAAGCGAAGATTGCCGACGAAGGTGTAGATCTTGAGTACGGTGCGCGCCCGTTAAGAAGAGCGATTCAAAAGCACG
TGGAAGATCGACTTTCTGAAGAGCTTCTGAAGGGCAATATTGAAAAAGGTCAACATATCGTATTAGATGTGGAAGATGGA
GAAATTGTCGTAAAAGCGACGGCTGCTACGAACTAA
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTAGGCCATAA
GAATATTGGTACTGAGCACATTTTACTTGGCCTTGTACGTGAAGGTGAGGGCATCGCTGCCAAAGCGTTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAAAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCTATTCCTCAT
TATACGCCTAGAGCGAAGAAGGTCACTGAGCTTTCAATGGATGAAGCAAGAAAGCTAGGTCATTCCTATGTAGGGACAGA
ACACATTCTATTAGGTCTTATTCGTGAGGGAGAGGGTGTCGCTGCCCGTGTCTTAAATAACCTCGGAGTGAGCTTAAATA
AAGCACGTCAGCAAGTCCTGCAGCTGCTTGGAAGCAATGAAACAGGTGCATCTGCGGCCGGCTCTAATAGCAATGCAAAT
ACACCAACACTAGATAGCTTGGCAAGAGATTTGACAGCTATCGCAAAAGAGGACAGCTTGGACCCTGTCATTGGCCGAAG
CAAAGAAATTCAACGTGTCATTGAGGTCCTAAGTAGAAGAACAAAAAATAACCCTGTGTTGATTGGTGAGCCTGGTGTTG
GTAAAACAGCCATTGCAGAAGGTCTTGCACAGCAAATTATTCATAATGAAGTACCTGAAATCCTGCGTGATAAACGAGTG
ATGACACTAGATATGGGAACAGTTGTAGCTGGTACGAAATATCGTGGTGAATTCGAGGATCGTTTGAAAAAAGTGATGGA
CGAAATTCGTCAGGCAGGAAATATCATTCTCTTTATCGATGAGCTTCATACGCTCATTGGTGCTGGTGGAGCAGAGGGTG
CAATTGATGCATCTAATATCTTGAAGCCATCCTTAGCACGTGGAGAGCTTCAATGTATTGGAGCGACAACGTTAGATGAG
TACCGTAAATATATTGAAAAGGATGCTGCGCTTGAACGACGTTTCCAGCCAATTCAAGTCGATCAGCCGTCTGTTGATGA
AAGTATTCAAATCTTAAGAGGGCTTAGAGACCGGTATGAAGCACATCACCGTGTGTCCATTACAGATGAAGCAATTGAGG
CGGCAGTGAAGCTGTCTGACCGTTATATTTCTGATCGTTTCCTTCCAGATAAGGCGATTGATTTAATTGATGAGGCAGGT
TCGAAAGTCCGTTTACGTTCGTTCACAACACCGCCTAACCTAAAAGAATTAGAGCAAAAGCTGGATGAAGTACGCAAGGA
AAAGGATGCAGCAGTTCAAAGTCAAGAATTTGAAAAAGCAGCTTCTCTTCGCGATACAGAGCAGCGTTTGCGTGAAAAAG
TAGAAGTCACAAAGAAATCATGGAAAGAAAAGCAGGGACAAGAGAATTCAGAGGTATCTGTAGATGATATTGCAATGGTC
GTTTCCAGCTGGACGGGAGTTCCTGTTTCGAAAATTGCTCAAACGGAGACAGATAAGCTTCTGAATATGGAACAATTGCT
CCACTCTCGTGTGATCGGGCAGGATGAAGCCGTTGTCGCTGTAGCGAAAGCTGTGAGACGTGCACGTGCTGGCCTGAAAG
ATCCGAAGCGTCCAATCGGCTCCTTTATCTTCTTAGGACCAACAGGGGTCGGTAAAACAGAGCTTGCAAGAGCACTCGCT
GAGTCTATTTTCGGTGATGAAGAAGCAATGATCCGTATTGATATGTCTGAATACATGGAGAAACACTCTACATCCAGACT
TGTCGGATCACCGCCAGGCTATGTCGGCTATGATGAAGGTGGACAGCTGACTGAAAAAGTGAGAAGAAAACCTTATTCTG
TCGTTCTTTTAGACGAGATTGAAAAGGCGCATCCAGATGTATTTAATATCTTACTGCAAGTGTTAGAAGATGGTCGTCTG
ACTGATTCTAAAGGACGTACCGTTGACTTTAGAAATACGATTTTGATCATGACATCAAACGTTGGAGCTAGTGAGCTGAA
GCGCAATAAATATGTTGGCTTTAACGTGCAGGATGAAGGTCAAAATTACAAGGATATGAAAGGCAAAGTGATGGGCGAGC
TGAAACGTGCGTTTAGACCTGAGTTTATCAACCGTATTGATGAAATCATTGTCTTCCACTCGCTTGAGAAGAAACATCTA
AAAGAGATCGTGTCTCTCATGTCTGATCAATTGACAAAACGATTAAAAGAACAAGACCTATCAATTGAATTGACGGAAGC
AGCAAAAGCGAAGATTGCCGACGAAGGTGTAGATCTTGAGTACGGTGCGCGCCCGTTAAGAAGAGCGATTCAAAAGCACG
TGGAAGATCGACTTTCTGAAGAGCTTCTGAAGGGCAATATTGAAAAAGGTCAACATATCGTATTAGATGTGGAAGATGGA
GAAATTGTCGTAAAAGCGACGGCTGCTACGAACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
96.054 |
100 |
0.961 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.383 |
99.877 |
0.493 |
| clpC | Streptococcus thermophilus LMD-9 |
46.368 |
100 |
0.472 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.005 |
100 |
0.469 |
| clpC | Streptococcus pneumoniae Rx1 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus pneumoniae D39 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus mutans UA159 |
43.556 |
100 |
0.45 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
49.229 |
87.916 |
0.433 |
| clpE | Streptococcus mutans UA159 |
53.478 |
79.778 |
0.427 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.868 |
79.531 |
0.42 |
| clpE | Streptococcus pneumoniae Rx1 |
52.868 |
79.531 |
0.42 |
| clpE | Streptococcus pneumoniae D39 |
52.868 |
79.531 |
0.42 |
| clpE | Streptococcus pneumoniae R6 |
52.868 |
79.531 |
0.42 |