Detailed information    

insolico Bioinformatically predicted

Overview


Name   letA   Type   Regulator
Locus tag   P795_RS16205 Genome accession   NC_023028
Coordinates   3489112..3489747 (+) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii ZW85-1     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 3484112..3494747
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P795_RS16185 (P795_16045) - 3484188..3485003 (+) 816 WP_000011163.1 DsbC family protein -
  P795_RS16190 (P795_16050) - 3485248..3486549 (+) 1302 WP_000805827.1 homoserine dehydrogenase -
  P795_RS16195 (P795_16055) thrC 3486605..3487744 (+) 1140 WP_000063593.1 threonine synthase -
  P795_RS16200 (P795_16060) pbpG 3487853..3488899 (-) 1047 WP_144080759.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  P795_RS16205 (P795_16065) letA 3489112..3489747 (+) 636 WP_000633799.1 response regulator Regulator
  P795_RS16210 (P795_16070) pilS 3489758..3491326 (+) 1569 WP_001160339.1 PAS domain-containing sensor histidine kinase Regulator
  P795_RS16215 (P795_16075) - 3491351..3492772 (+) 1422 WP_023897413.1 sigma-54 dependent transcriptional regulator -
  P795_RS16220 (P795_16080) - 3492776..3493960 (-) 1185 WP_000939109.1 S41 family peptidase -

Sequence


Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=53180 P795_RS16205 WP_000633799.1 3489112..3489747(+) (letA) [Acinetobacter baumannii ZW85-1]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=53180 P795_RS16205 WP_000633799.1 3489112..3489747(+) (letA) [Acinetobacter baumannii ZW85-1]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCGGGCATCGGTGGCGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGCGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55

  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55


Multiple sequence alignment