Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   JNE32_RS06110 Genome accession   NZ_CP068982
Coordinates   1181883..1182539 (+) Length   218 a.a.
NCBI ID   WP_015383354.1    Uniprot ID   -
Organism   Bacillus subtilis strain pb2441     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1176883..1187539
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JNE32_RS06080 (JNE32_06050) oppF 1177348..1178265 (+) 918 WP_003245567.1 oligopeptide ABC transporter ATP-binding protein OppF -
  JNE32_RS06085 (JNE32_06055) yjbB 1178372..1179589 (+) 1218 WP_010886478.1 MFS transporter -
  JNE32_RS06090 (JNE32_06060) yjbC 1179753..1180331 (+) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  JNE32_RS06095 (JNE32_06065) spx 1180512..1180907 (+) 396 WP_003245483.1 transcriptional regulator Spx -
  JNE32_RS06100 (JNE32_06070) yjbE 1180950..1181606 (-) 657 WP_003232944.1 TerC family protein -
  JNE32_RS06105 (JNE32_06075) - 1181776..1181916 (+) 141 WP_121572562.1 hypothetical protein -
  JNE32_RS06110 (JNE32_06080) mecA 1181883..1182539 (+) 657 WP_015383354.1 adaptor protein MecA Regulator
  JNE32_RS06115 (JNE32_06085) - 1182534..1182655 (-) 122 Protein_1139 hypothetical protein -
  JNE32_RS06120 (JNE32_06090) coiA 1182699..1183850 (+) 1152 WP_029726275.1 competence protein CoiA Machinery gene
  JNE32_RS06125 (JNE32_06095) pepF 1184080..1185909 (+) 1830 WP_174243753.1 oligoendopeptidase F -
  JNE32_RS06130 (JNE32_06100) - 1185947..1186114 (-) 168 WP_003244944.1 hypothetical protein -
  JNE32_RS06135 (JNE32_06105) spxH 1186429..1187328 (-) 900 WP_003245184.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25749.62 Da        Isoelectric Point: 4.0841

>NTDB_id=531718 JNE32_RS06110 WP_015383354.1 1181883..1182539(+) (mecA) [Bacillus subtilis strain pb2441]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSNLNVNGSKTTLYSFENR
YYLYVDFCNMTDEEVENQLSILLEYATESSISIHRLEEYGKLIISEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=531718 JNE32_RS06110 WP_015383354.1 1181883..1182539(+) (mecA) [Bacillus subtilis strain pb2441]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTACGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTTTTCTGGGAAGTCATGGATGAAGTTCATGAAGAAGAGGAAT
TCGCTGTGGAAGGCCCACTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTCCAGAAAGAAGAGCAAGCCGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGATTTG
GCGATTTTGAGGATGTTATTTCTCTATCTAATTTGAACGTTAACGGAAGCAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTAGATTTTTGCAATATGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGCTGGAGTACGCAAC
TGAATCCTCAATCAGCATACACCGTCTTGAAGAGTACGGCAAGCTGATTATTTCAGAGCATGCTCTAGAAACGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

99.541

100

0.995