Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   JM964_RS09225 Genome accession   NZ_CP068708
Coordinates   1905001..1906260 (-) Length   419 a.a.
NCBI ID   WP_024379118.1    Uniprot ID   -
Organism   Streptococcus suis strain ID33329     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1900001..1911260
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JM964_RS09200 (JM964_09200) dhaS 1900168..1900713 (-) 546 WP_014736432.1 dihydroxyacetone kinase transcriptional activator DhaS -
  JM964_RS09205 (JM964_09205) dhaK 1900861..1901850 (+) 990 WP_202847558.1 dihydroxyacetone kinase subunit DhaK -
  JM964_RS09210 (JM964_09210) dhaL 1901861..1902436 (+) 576 WP_202847559.1 dihydroxyacetone kinase subunit DhaL -
  JM964_RS09215 (JM964_09215) dhaM 1902433..1902807 (+) 375 WP_024379120.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  JM964_RS09220 (JM964_09220) - 1902853..1904706 (-) 1854 WP_099776993.1 proline--tRNA ligase -
  JM964_RS09225 (JM964_09225) eeP 1905001..1906260 (-) 1260 WP_024379118.1 RIP metalloprotease RseP Regulator
  JM964_RS09230 (JM964_09230) - 1906270..1907076 (-) 807 WP_014638692.1 phosphatidate cytidylyltransferase -
  JM964_RS09235 (JM964_09235) - 1907086..1907841 (-) 756 WP_013730586.1 isoprenyl transferase -
  JM964_RS09240 (JM964_09240) yajC 1907955..1908278 (-) 324 WP_002940126.1 preprotein translocase subunit YajC -
  JM964_RS09245 (JM964_09245) - 1908388..1909680 (-) 1293 WP_202847560.1 adenylosuccinate synthase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 45004.35 Da        Isoelectric Point: 5.0863

>NTDB_id=530569 JM964_RS09225 WP_024379118.1 1905001..1906260(-) (eeP) [Streptococcus suis strain ID33329]
MKGILAFIFIFGVIVVVHEFGHFYFAKKAGILVREFAIGMGPKIFAHTGKDGTLYTIRILPLGGYVRMAGWGEDKTEIKT
GSPASLSLNEAGVVTRINLSGKQLDSLSLPMNVTSFDFEEKLEITGLVLEESKTYKVDHDATIVEEDGTEVRIAPLDVQY
QNATVWGKLITNFAGPMNNFILGILIFILLFFMQGGVANPSSNAVSITEGGALQAAGVVTGDKILSVNGNTTDSYTEVAT
IISKAATDATTAPSFDLVVEHEGTEKSLTVTAEKVDDSYRIGISPILKTGFLDKIIGGFQQAGATAVIVVTALKNLIANF
DVKQLGGPIAIYSVSNQAAANGWVSVFNLMAMLSINIGIFNLIPIPALDGGKIVMNILEGIRRKPLKPETESYITLAGVA
IMVVLMLVVTWNDIMRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=530569 JM964_RS09225 WP_024379118.1 1905001..1906260(-) (eeP) [Streptococcus suis strain ID33329]
ATGAAGGGAATTTTAGCATTTATATTTATATTTGGTGTGATTGTGGTTGTCCATGAATTTGGTCATTTCTACTTTGCCAA
GAAAGCTGGTATCCTTGTGAGGGAATTTGCGATTGGGATGGGTCCCAAAATTTTCGCTCATACAGGTAAGGATGGGACAC
TTTACACCATCCGTATCCTTCCCCTAGGTGGCTATGTTCGAATGGCTGGATGGGGTGAAGATAAGACAGAGATTAAGACA
GGTAGTCCTGCCAGTCTCAGCTTGAATGAAGCTGGTGTTGTGACGCGGATTAATTTGTCTGGTAAGCAACTGGATAGTCT
CAGTTTGCCAATGAATGTAACCAGTTTTGACTTTGAAGAAAAATTGGAAATCACAGGCTTGGTCTTGGAAGAAAGCAAGA
CCTATAAGGTTGATCACGATGCCACGATTGTAGAGGAAGATGGGACAGAAGTTCGGATTGCTCCACTTGATGTTCAGTAT
CAAAATGCGACAGTCTGGGGGAAGTTGATAACCAACTTTGCGGGTCCCATGAATAACTTTATTTTAGGAATTCTAATATT
TATTCTTTTGTTCTTCATGCAAGGCGGGGTTGCCAACCCATCAAGCAATGCAGTAAGTATTACTGAAGGTGGTGCTTTGC
AGGCGGCAGGTGTTGTCACAGGGGACAAGATTCTTTCGGTCAATGGGAACACGACAGACAGCTACACAGAAGTTGCAACG
ATTATTAGCAAAGCAGCGACAGATGCAACAACAGCCCCAAGCTTTGATTTGGTTGTTGAGCATGAGGGGACTGAAAAATC
GCTCACAGTTACTGCTGAGAAGGTTGACGATAGCTACCGAATTGGAATTTCACCGATTTTAAAAACTGGTTTCCTTGATA
AGATTATTGGGGGCTTCCAGCAAGCGGGTGCGACAGCAGTTATTGTTGTAACTGCCTTGAAAAACTTGATTGCCAATTTT
GATGTTAAGCAATTGGGTGGACCTATTGCCATTTATTCTGTCAGCAATCAGGCTGCTGCAAATGGTTGGGTTTCAGTCTT
TAACCTGATGGCTATGCTATCAATCAATATCGGTATTTTCAATCTTATCCCTATTCCAGCCTTGGATGGTGGGAAGATTG
TCATGAACATTCTAGAAGGTATTCGCAGAAAACCACTTAAACCAGAAACAGAATCCTATATCACGCTGGCAGGCGTTGCA
ATCATGGTTGTCCTCATGCTGGTCGTGACCTGGAATGATATTATGCGTGTATTCTTCTAA

Domains


Predicted by InterproScan.

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

63.571

100

0.637

  eeP Streptococcus thermophilus LMD-9

63.333

100

0.635