Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   LLUC073_RS09470 Genome accession   NZ_CP068698
Coordinates   1826123..1826824 (-) Length   233 a.a.
NCBI ID   WP_282670990.1    Uniprot ID   -
Organism   Lactococcus cremoris strain UC073     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 1821123..1831824
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LLUC073_RS09450 (LLUC073_09230) - 1821236..1822453 (-) 1218 WP_014572151.1 cysteine desulfurase -
  LLUC073_RS09455 (LLUC073_09235) sufD 1822453..1823709 (-) 1257 WP_011676799.1 Fe-S cluster assembly protein SufD -
  LLUC073_RS09460 (LLUC073_09240) sufC 1823849..1824619 (-) 771 WP_282670988.1 Fe-S cluster assembly ATPase SufC -
  LLUC073_RS09465 (LLUC073_09245) - 1824795..1826120 (-) 1326 WP_282670989.1 MraY family glycosyltransferase -
  LLUC073_RS09470 (LLUC073_09250) mecA 1826123..1826824 (-) 702 WP_282670990.1 adaptor protein MecA Regulator
  LLUC073_RS09475 (LLUC073_09255) - 1826953..1827687 (-) 735 WP_011676803.1 amino acid ABC transporter ATP-binding protein -
  LLUC073_RS09480 (LLUC073_09260) - 1827687..1828373 (-) 687 WP_282670991.1 amino acid ABC transporter permease -
  LLUC073_RS09485 (LLUC073_09265) - 1828519..1829427 (-) 909 WP_282670992.1 diacylglycerol kinase family protein -

Sequence

Protein


Download         Length: 233 a.a.        Molecular weight: 27060.49 Da        Isoelectric Point: 4.1802

>NTDB_id=530478 LLUC073_RS09470 WP_282670990.1 1826123..1826824(-) (mecA) [Lactococcus cremoris strain UC073]
MKYEDINENTIKITLSFDDLTDYDIKLSDFFGNQEVIEQFFYELVDELGLENRFGNLGMLTFQIQPFPQGVHMIVHEEAM
LGEGGEIPDDPEEFEELMTGFYNKLNEIGADMARERGITDFKPGLGLPGAKKEEAEHEPDFIYYSIRYDDMMSVLTGIKN
VKFADEESEFYRYDGNFYLVVLDNQKAKGKMHVESTRSRMMEYGEATKMSREFLQEYGECLITTRALDVLRKI

Nucleotide


Download         Length: 702 bp        

>NTDB_id=530478 LLUC073_RS09470 WP_282670990.1 1826123..1826824(-) (mecA) [Lactococcus cremoris strain UC073]
ATGAAGTATGAGGATATAAATGAAAACACTATAAAAATCACCTTGTCTTTTGATGATTTGACAGATTATGATATCAAGTT
ATCTGACTTTTTTGGAAATCAAGAAGTCATTGAACAATTTTTCTATGAATTAGTTGATGAACTTGGCTTAGAAAATCGTT
TTGGAAATTTAGGGATGTTAACTTTCCAAATTCAACCCTTCCCACAAGGCGTCCATATGATTGTTCATGAAGAAGCAATG
TTGGGTGAAGGCGGAGAGATTCCAGATGATCCTGAAGAATTTGAAGAATTAATGACTGGTTTTTATAATAAATTAAATGA
AATAGGGGCAGATATGGCGCGCGAGCGAGGAATTACTGATTTTAAACCTGGACTTGGTTTACCAGGGGCTAAAAAAGAAG
AAGCCGAACATGAGCCAGACTTTATATACTACTCTATTCGTTATGATGACATGATGTCTGTCTTGACTGGAATAAAAAAT
GTGAAATTCGCAGATGAAGAGTCAGAATTTTATCGTTATGATGGTAATTTTTATCTTGTTGTTTTAGATAATCAAAAAGC
AAAAGGTAAAATGCATGTTGAAAGCACACGTTCACGGATGATGGAATATGGTGAAGCGACAAAAATGAGTCGAGAATTTT
TGCAGGAGTATGGTGAATGCCTAATCACAACGCGTGCTTTAGACGTTCTTAGAAAAATCTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-230)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Lactococcus lactis subsp. cremoris KW2

99.571

100

0.996
  mecA Lactococcus lactis subsp. lactis strain DGCC12653

96.137

100

0.961