Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   LLUC047_RS12300 Genome accession   NZ_CP068658
Coordinates   2354235..2355521 (-) Length   428 a.a.
NCBI ID   WP_011677189.1    Uniprot ID   A0A165FD42
Organism   Lactococcus cremoris strain UC047     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2349235..2360521
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LLUC047_RS13680 - 2349740..2350333 (-) 594 Protein_2390 PolC-type DNA polymerase III N-terminal domain-containing protein -
  LLUC047_RS12285 (LLUC047_14315) - 2350507..2350698 (-) 192 WP_021211222.1 hypothetical protein -
  LLUC047_RS12290 (LLUC047_12000) - 2350968..2352299 (-) 1332 WP_021211223.1 FAD/NAD(P)-binding oxidoreductase -
  LLUC047_RS12295 (LLUC047_12005) - 2352315..2354165 (-) 1851 WP_021211224.1 proline--tRNA ligase -
  LLUC047_RS12300 (LLUC047_12010) eeP 2354235..2355521 (-) 1287 WP_011677189.1 RIP metalloprotease RseP Regulator
  LLUC047_RS12305 (LLUC047_12015) - 2355540..2356343 (-) 804 WP_011677190.1 phosphatidate cytidylyltransferase -
  LLUC047_RS12310 (LLUC047_12020) - 2356343..2357077 (-) 735 WP_011836054.1 isoprenyl transferase -
  LLUC047_RS12315 (LLUC047_12025) yajC 2357427..2357759 (-) 333 WP_011677192.1 preprotein translocase subunit YajC -
  LLUC047_RS12320 (LLUC047_12030) - 2357854..2358552 (-) 699 Protein_2398 DNA alkylation repair protein -
  LLUC047_RS12325 (LLUC047_12035) rlmH 2358570..2359049 (-) 480 WP_011677194.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  LLUC047_RS12330 (LLUC047_12040) - 2359258..2360148 (+) 891 WP_015081999.1 IS982-like element IS982B family transposase -

Sequence

Protein


Download         Length: 428 a.a.        Molecular weight: 46441.01 Da        Isoelectric Point: 6.5140

>NTDB_id=530282 LLUC047_RS12300 WP_011677189.1 2354235..2355521(-) (eeP) [Lactococcus cremoris strain UC047]
MIETLITFIIIFGIIVAIHEYGHLWWAKRSGILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLVVSKSEAVNSGDENSVSNIVRRINLSEHVELEEAVPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIVPLDVQYQSAGVFHKMLTNFGGPLNNFILGLVAFIVLTFIQGGVPSNSNAIGQVEKGTPAYTAGLKSGDKIQAV
NGTKTADWDKLVTEISSSNGKELKLEIIRSGKSETLAVTPKKMDGSYRVGIMQSMKTGFFDKITGGFVQAGQATTAIFRA
LGSLIARPSLDKLGGPVAIYQLSGQAARAGLPTIIQLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSPEKES
IITLVGVVFMLVLFMAVTWNDILRAFVN

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=530282 LLUC047_RS12300 WP_011677189.1 2354235..2355521(-) (eeP) [Lactococcus cremoris strain UC047]
TTGATAGAAACTCTGATTACTTTTATTATTATTTTTGGTATTATTGTCGCTATTCATGAATATGGTCACCTTTGGTGGGC
AAAACGTTCTGGAATTCTAGTGCGTGAATATGCCGTAGGAATGGGGCCGAAGATTTTTGCTCATCAAGCAAAAGATGGAA
CGCTCTACACGATTCGAATTTTACCGCTTGGTGGCTATGTTCGTTTGGCCGGCTGGGGTGATGATAAAACTGAAATAAAA
AAAGGACAAGCTGCAAGTCTGGTTGTCAGTAAATCTGAAGCAGTAAATTCAGGAGATGAAAATTCTGTCAGTAATATTGT
CAGAAGAATTAATCTGTCAGAACATGTGGAATTAGAAGAAGCTGTTCCAATGTTAATCACTGAATATGATTTTGAAAAAG
AACTTTTCATTGAAGGAGAAGTGTTTGGAGAAATCAAACGTTATTCAGTTGACCATGATGCCACAATTATTGAAGAAGAT
GGCACTGAAGTCCGGATTGTTCCTCTTGATGTTCAATATCAATCAGCAGGGGTCTTCCATAAGATGTTGACGAATTTCGG
TGGTCCTTTGAATAACTTTATTCTAGGACTTGTCGCTTTTATCGTTTTAACTTTTATTCAAGGAGGCGTTCCATCAAATT
CTAATGCTATTGGGCAAGTAGAAAAAGGAACACCAGCCTACACCGCAGGCTTGAAATCTGGAGATAAAATTCAAGCTGTC
AATGGAACTAAAACAGCAGATTGGGATAAATTGGTCACAGAAATTTCAAGTTCTAATGGAAAAGAATTAAAACTTGAAAT
TATCCGCTCAGGCAAATCAGAAACTTTGGCAGTTACCCCTAAAAAGATGGATGGCAGTTATCGTGTTGGAATCATGCAAT
CTATGAAAACAGGCTTCTTTGATAAAATTACAGGTGGTTTTGTTCAAGCAGGACAAGCGACCACAGCAATTTTCAGAGCA
TTAGGAAGTCTGATTGCACGACCGAGTCTTGATAAACTGGGTGGGCCAGTTGCCATCTATCAACTCAGCGGACAAGCGGC
AAGAGCAGGTTTGCCAACAATTATTCAGTTGTTAGCTATGCTCTCAATTAACTTAGGAATTGTCAATCTTTTCCCTATTC
CAGTGCTTGACGGTGGAAAAATCGTCTTAAATATTATTGAAGCAATTCGTGGCAAAGCACTTTCGCCTGAGAAAGAATCA
ATTATCACATTAGTCGGAGTTGTCTTCATGCTTGTGCTCTTTATGGCTGTAACATGGAATGACATTCTACGGGCTTTTGT
CAACTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(217-279)

Peptidase family M50 (Peptidase_M50)

(7-413)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A165FD42

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

55.916

100

0.563
  eeP Streptococcus thermophilus LMD-9

55.684

100

0.561