Detailed information NTG0530059

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K8B79_RS23730
• Genome accession: NZ_CP082824
• Coordinates: 4869043..4870068 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644911.1
• Uniprot ID: -
• Organism: Escherichia coli strain SCAID URN1-2021 (19/278)
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4864043..4875068

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K8B79_RS23710 (K8B79_23710)	metJ	4865228..4865545 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
K8B79_RS23715 (K8B79_23715)	yiiX	4865605..4866213 (+)	609	WP_000702298.1	YiiX family permuted papain-like enzyme	-
K8B79_RS23720 (K8B79_23720)	rpmE	4866274..4866486 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
K8B79_RS23725 (K8B79_23725)	priA	4866689..4868887 (+)	2199	WP_001540348.1	primosomal protein N'	Machinery gene
K8B79_RS23730 (K8B79_23730)	cytR	4869043..4870068 (+)	1026	WP_000644911.1	DNA-binding transcriptional regulator CytR	Regulator
K8B79_RS23735 (K8B79_23735)	ftsN	4870160..4871119 (+)	960	WP_000068847.1	cell division protein FtsN	-
K8B79_RS23740 (K8B79_23740)	hslV	4871212..4871742 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
K8B79_RS23745 (K8B79_23745)	hslU	4871752..4873083 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
K8B79_RS23750 (K8B79_23750)	menA	4873150..4874076 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
K8B79_RS23755 (K8B79_23755)	rraA	4874169..4874654 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
K8B79_RS23760 (K8B79_23760)	zapB	4874739..4874984 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37805.71 Da
• Isoelectric Point: 6.1617

>NTDB_id=530059 K8B79_RS23730 WP_000644911.1 4869043..4870068(+) (cytR) [Escherichia coli strain SCAID URN1-2021 (19/278)]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHNRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=530059 K8B79_RS23730 WP_000644911.1 4869043..4870068(+) (cytR) [Escherichia coli strain SCAID URN1-2021 (19/278)]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGTACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAATCGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCTGGAAGCAAAGCAATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625