Detailed information NTG0529641

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: JL104_RS06950
• Genome accession: NZ_CP068576
• Coordinates: 1410191..1411165 (+)
• Length: 324 a.a.
• NCBI ID: WP_002507503.1
• Uniprot ID: -
• Organism: Staphylococcus equorum strain KS1030
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1405191..1416165

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JL104_RS06920	-	1405372..1405911 (+)	540	WP_002507497.1	5-formyltetrahydrofolate cyclo-ligase	-
JL104_RS06925	-	1405926..1407383 (+)	1458	WP_103170370.1	rhomboid family protein	-
JL104_RS06930	-	1407367..1407567 (+)	201	WP_002512453.1	YqgQ family protein	-
JL104_RS06935	-	1408157..1409143 (+)	987	WP_002507500.1	glucokinase	-
JL104_RS06940	-	1409143..1409466 (+)	324	WP_202809363.1	MTH1187 family thiamine-binding protein	-
JL104_RS06945	-	1409468..1410091 (+)	624	WP_002507502.1	MBL fold metallo-hydrolase	-
JL104_RS06950	comGA	1410191..1411165 (+)	975	WP_002507503.1	competence type IV pilus ATPase ComGA	Machinery gene
JL104_RS06955	comGB	1411137..1412204 (+)	1068	WP_040762875.1	competence type IV pilus assembly protein ComGB	-
JL104_RS06960	comGC	1412229..1412546 (+)	318	WP_056936206.1	competence type IV pilus major pilin ComGC	Machinery gene
JL104_RS06965	-	1412569..1412970 (+)	402	WP_103170381.1	competence protein	-
JL104_RS06970	-	1412957..1413256 (+)	300	WP_002507507.1	hypothetical protein	-
JL104_RS06975	comGF	1413228..1413671 (+)	444	WP_202809364.1	competence type IV pilus minor pilin ComGF	-
JL104_RS06980	-	1413878..1414351 (+)	474	WP_230456625.1	shikimate kinase	-
JL104_RS06985	gcvT	1414530..1415621 (+)	1092	WP_202809365.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37330.45 Da
• Isoelectric Point: 9.0536

>NTDB_id=529641 JL104_RS06950 WP_002507503.1 1410191..1411165(+) (comGA) [Staphylococcus equorum strain KS1030]
MKLLFNNIIEKAIQRNATDIHFIPSEKEVYIKFRIQDDLTFIESIQTHVYRKLLTYMKYQAGLDVSKHNSAQSGRYIYKL
KQIFYLRISTLPLSLGNESCVVRIIPQYFQKQNITHDIEKLYTLMNKKQGLILFSGPTGSGKSTLMYQMVMYAKEKLGLN
IITVEDPVEQLVEGVTQVSINEKAGINYESSFKAILRCDPDIILIGEVRDPTIAKYVIQASLSGHLVLTTIHANNCKGAL
LRLLEMGITKQEIKQSILSVLNQRLITIYNSERKLIYEQLLQHDISYFLNNDYTLPNHFHNLSFHLKQMSKAGVICEETV
DRYI

Nucleotide

• Length: 975 bp

>NTDB_id=529641 JL104_RS06950 WP_002507503.1 1410191..1411165(+) (comGA) [Staphylococcus equorum strain KS1030]
TTGAAGCTATTATTTAACAACATAATTGAGAAAGCAATTCAGAGAAATGCTACTGATATACACTTTATACCTTCTGAAAA
GGAAGTGTATATCAAATTTAGAATTCAGGATGATTTAACTTTTATTGAATCAATTCAGACACATGTTTATAGAAAGCTGC
TTACTTATATGAAATATCAAGCTGGATTAGATGTATCAAAACATAATTCGGCACAAAGTGGAAGATACATATATAAACTA
AAACAAATATTTTATTTAAGAATCTCTACGTTACCATTGTCTCTCGGTAATGAAAGTTGTGTTGTAAGAATCATTCCTCA
ATATTTTCAAAAGCAAAATATCACTCATGATATTGAAAAACTGTATACATTAATGAATAAAAAGCAAGGTTTAATACTAT
TTAGCGGTCCAACTGGATCTGGTAAAAGTACTTTAATGTATCAAATGGTTATGTATGCAAAGGAAAAGTTAGGTTTAAAT
ATCATAACTGTAGAAGATCCGGTGGAACAATTAGTTGAGGGTGTTACTCAAGTTTCTATCAATGAAAAGGCAGGTATTAA
TTATGAGAGTTCTTTTAAGGCAATACTAAGGTGTGATCCAGACATTATACTTATTGGAGAAGTTAGAGATCCTACGATAG
CAAAATACGTTATACAAGCAAGTTTAAGTGGTCACTTAGTACTAACTACAATACATGCTAACAATTGTAAGGGCGCGTTA
TTAAGATTATTAGAAATGGGCATAACAAAACAAGAAATTAAACAATCTATTTTGAGTGTGTTAAACCAAAGACTAATCAC
AATATATAACAGTGAAAGAAAATTAATTTATGAACAGTTACTACAACACGATATAAGTTATTTTTTAAATAATGATTACA
CATTACCAAACCATTTTCATAATTTATCCTTTCATTTAAAGCAAATGTCTAAAGCAGGTGTTATTTGTGAAGAAACTGTT
GATCGCTATATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	61.111	100	0.611
comGA	Staphylococcus aureus N315	61.111	100	0.611