Detailed information NTG0529567

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: K8B76_RS01175
• Genome accession: NZ_CP082820
• Coordinates: 218709..219707 (+)
• Length: 332 a.a.
• NCBI ID: WP_025171978.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain SCAID PHRX1-2021
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 213709..224707

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K8B76_RS01150 (K8B76_01150)	-	214788..215849 (+)	1062	WP_001260285.1	GTP pyrophosphokinase family protein	-
K8B76_RS01155 (K8B76_01155)	-	216076..216771 (+)	696	WP_001144917.1	GNAT family N-acetyltransferase	-
K8B76_RS01160 (K8B76_01160)	-	216783..217199 (+)	417	WP_000628381.1	GNAT family N-acetyltransferase	-
K8B76_RS01165 (K8B76_01165)	-	218051..218143 (-)	93	WP_000970294.1	type I toxin-antitoxin system Fst family toxin	-
K8B76_RS01170 (K8B76_01170)	-	218484..218576 (-)	93	WP_000970377.1	type I toxin-antitoxin system Fst family toxin	-
K8B76_RS01175 (K8B76_01175)	ruvB	218709..219707 (+)	999	WP_025171978.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
K8B76_RS01180 (K8B76_01180)	-	219688..220261 (+)	574	Protein_236	nucleotidyltransferase family protein	-
K8B76_RS01185 (K8B76_01185)	-	220492..221250 (+)	759	WP_000466719.1	isoprenyl transferase	-
K8B76_RS01190 (K8B76_01190)	-	221259..222062 (+)	804	WP_000189866.1	phosphatidate cytidylyltransferase	-
K8B76_RS01195 (K8B76_01195)	eeP	222084..223343 (+)	1260	WP_000900662.1	RIP metalloprotease RseP	Regulator

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 37319.76 Da
• Isoelectric Point: 4.5018

>NTDB_id=529567 K8B76_RS01175 WP_025171978.1 218709..219707(+) (ruvB) [Streptococcus pneumoniae strain SCAID PHRX1-2021]
MSRILDNEIMGDEELVERTLRPQYLREYIGQDKVKDQLQIFIEAAKMRDEALDHVLLFGPPGLGKTTMAFVIANELGVNL
KQTSGPVIEKAGDLVAILNDLEPGDVLFIDEIHRLPMSVEEVLYSAMEDFYIDIMIGAGEGSRSVHLELPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYAHADLTEIVERTADIFEMEITHEAASELALRSRGTPRIANRLLKRVRDFAQIMGDGVIN
DVITDKALTMLDVDHEGLDYVDQKILRTMIEMYSGGPVGLGTLSVNIAEERETVEDMYEPYLIQKGFIMRTRSGRMATAK
AYEHLGYEYNEK

Nucleotide

• Length: 999 bp

>NTDB_id=529567 K8B76_RS01175 WP_025171978.1 218709..219707(+) (ruvB) [Streptococcus pneumoniae strain SCAID PHRX1-2021]
ATGAGTAGAATTTTAGATAATGAGATAATGGGGGACGAGGAGTTAGTAGAACGCACGCTCCGTCCTCAGTACTTACGTGA
ATATATTGGGCAGGATAAGGTTAAGGACCAGCTTCAAATCTTTATAGAAGCTGCCAAAATGCGAGATGAAGCGCTGGATC
ATGTCCTCTTATTTGGGCCTCCAGGTTTGGGGAAAACGACCATGGCTTTTGTTATTGCCAACGAACTAGGTGTCAATCTC
AAGCAGACTTCGGGTCCAGTCATTGAAAAAGCCGGAGATCTGGTAGCAATTTTGAATGACTTAGAGCCTGGGGATGTCCT
CTTTATTGATGAGATTCATCGCTTGCCTATGTCGGTGGAAGAGGTGCTTTATAGTGCCATGGAGGACTTTTACATAGATA
TTATGATTGGGGCTGGTGAAGGCAGTCGCAGTGTTCATTTGGAGTTACCACCTTTTACCTTGATTGGTGCGACGACTCGG
GCTGGTATGCTCTCAAATCCACTACGGGCACGTTTTGGGATTACAGGTCATATGGAGTATTATGCTCATGCTGACTTGAC
GGAAATTGTCGAGCGGACGGCAGATATTTTTGAGATGGAAATCACTCATGAGGCAGCGTCTGAGTTGGCCCTACGTAGCC
GTGGAACCCCTCGTATTGCCAATCGTCTCCTCAAGCGCGTGCGCGATTTTGCCCAGATTATGGGGGATGGGGTTATCAAT
GATGTTATTACGGATAAGGCTTTGACCATGCTGGATGTTGACCATGAAGGTCTGGACTATGTGGACCAAAAAATCCTTCG
GACCATGATTGAGATGTACAGTGGAGGGCCTGTTGGTTTAGGAACTCTTTCTGTGAATATTGCCGAGGAGCGCGAGACGG
TGGAGGACATGTATGAACCTTACTTAATCCAAAAAGGTTTTATCATGCGGACACGGTCTGGACGGATGGCGACTGCTAAG
GCATATGAGCATTTGGGGTATGAGTACAATGAAAAATAA

Domains

Predicted by InterProScan.

• RuvB AAA lid domain (AAA_lid_4) (181-254)

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae TIGR4	98.494	100	0.985
ruvB	Streptococcus pneumoniae R6	98.193	100	0.982
ruvB	Streptococcus pneumoniae D39	98.193	100	0.982
ruvB	Bacillus subtilis subsp. subtilis str. 168	60.736	98.193	0.596
ruvB	Helicobacter pylori 26695	50.464	97.289	0.491
ruvB	Synechocystis sp. PCC 6803	47.892	100	0.479