Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   JKJ03_RS14695 Genome accession   NZ_CP068563
Coordinates   2997509..2998153 (-) Length   214 a.a.
NCBI ID   WP_003152052.1    Uniprot ID   A3KLB8
Organism   Bacillus velezensis strain GUMT319     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2992509..3003153
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JKJ03_RS14660 (JKJ03_14660) - 2993694..2994125 (+) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -
  JKJ03_RS14665 (JKJ03_14665) - 2994125..2994466 (+) 342 WP_039254062.1 Na(+)/H(+) antiporter subunit C -
  JKJ03_RS14670 (JKJ03_14670) - 2994459..2995940 (+) 1482 WP_039254060.1 Na+/H+ antiporter subunit D -
  JKJ03_RS14675 (JKJ03_14675) - 2995946..2996422 (+) 477 WP_003152059.1 Na+/H+ antiporter subunit E -
  JKJ03_RS14680 (JKJ03_14680) - 2996422..2996706 (+) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  JKJ03_RS14685 (JKJ03_14685) mnhG 2996690..2997064 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  JKJ03_RS14690 (JKJ03_14690) - 2997104..2997487 (-) 384 WP_007613430.1 hotdog fold thioesterase -
  JKJ03_RS14695 (JKJ03_14695) comA 2997509..2998153 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  JKJ03_RS14700 (JKJ03_14700) comP 2998234..3000525 (-) 2292 WP_039254056.1 histidine kinase Regulator
  JKJ03_RS14705 (JKJ03_14705) comX 3000537..3000701 (-) 165 WP_007613432.1 competence pheromone ComX -
  JKJ03_RS14710 (JKJ03_14710) - 3000701..3001612 (-) 912 WP_031378407.1 polyprenyl synthetase family protein -
  JKJ03_RS14715 (JKJ03_14715) degQ 3001764..3001904 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  JKJ03_RS14720 (JKJ03_14720) - 3002370..3002711 (+) 342 WP_202735689.1 hypothetical protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24271.68 Da        Isoelectric Point: 4.9953

>NTDB_id=529487 JKJ03_RS14695 WP_003152052.1 2997509..2998153(-) (comA) [Bacillus velezensis strain GUMT319]
MKKILVIDDHPAVMEGTKTILETDTNLSVDCLSPDASEQFVLRHDFSAYDLILMDLNLGDDISGIELSKKILKENPLCKI
IVYTGYEVEDYFEESIRAGLHGAISKTESKEKIMQYIYHVLNGQILVDFSYFKQLMTQQKTKTSSSPQSEQDRLTPRERH
ILQEVEKGLTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDNVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=529487 JKJ03_RS14695 WP_003152052.1 2997509..2998153(-) (comA) [Bacillus velezensis strain GUMT319]
ATGAAAAAGATACTAGTGATTGATGATCATCCGGCTGTCATGGAGGGCACCAAGACGATTCTGGAAACGGACACGAATCT
TTCTGTCGATTGCCTTAGTCCTGATGCCAGTGAACAATTCGTTCTCCGGCATGATTTTTCAGCTTACGATCTCATATTAA
TGGATTTAAATCTGGGTGATGACATCAGCGGCATAGAGCTTTCCAAGAAAATCTTAAAAGAGAATCCTCTCTGCAAAATC
ATTGTCTACACAGGCTATGAGGTTGAAGATTATTTTGAAGAATCCATCCGCGCGGGCCTGCATGGCGCCATCAGCAAAAC
CGAATCTAAAGAGAAAATCATGCAATACATATATCACGTGCTCAACGGACAGATTTTAGTTGATTTCTCCTATTTCAAAC
AGCTGATGACCCAGCAAAAAACAAAAACGTCTTCTTCCCCTCAAAGTGAGCAGGATCGGTTAACTCCGAGAGAGCGCCAT
ATTCTCCAAGAGGTCGAAAAAGGTTTGACCAATCAGGAAATCGCAGATGCGCTTCACTTAAGCAAGCGGTCGATTGAATA
CAGCCTGACATCCATTTTTAATAAGCTGAATGTCGGCTCCCGTACTGAAGCGGTGCTGATCGCCAAGTCAGATAACGTAC
TATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-117)

Bacterial regulatory proteins, luxR family (GerE)

(153-208)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3KLB8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

86.449

100

0.864