Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   K3B00_RS06380 Genome accession   NZ_CP082789
Coordinates   1293739..1295025 (+) Length   428 a.a.
NCBI ID   WP_000121118.1    Uniprot ID   -
Organism   Staphylococcus aureus strain HL24830     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1288739..1300025
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K3B00_RS06350 (K3B00_001265) - 1289134..1289247 (+) 114 WP_001789890.1 hypothetical protein -
  K3B00_RS06355 (K3B00_001266) tsf 1289282..1290163 (+) 882 WP_223065259.1 translation elongation factor Ts -
  K3B00_RS06360 (K3B00_001267) pyrH 1290300..1291022 (+) 723 WP_000057330.1 UMP kinase -
  K3B00_RS06365 (K3B00_001268) frr 1291041..1291595 (+) 555 WP_001280006.1 ribosome recycling factor -
  K3B00_RS06370 (K3B00_001269) - 1291968..1292738 (+) 771 WP_000473699.1 isoprenyl transferase -
  K3B00_RS06375 (K3B00_001270) - 1292745..1293527 (+) 783 WP_001266120.1 phosphatidate cytidylyltransferase -
  K3B00_RS06380 (K3B00_001271) eeP 1293739..1295025 (+) 1287 WP_000121118.1 RIP metalloprotease RseP Regulator
  K3B00_RS06385 (K3B00_001272) - 1295045..1296748 (+) 1704 WP_000814094.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 48134.53 Da        Isoelectric Point: 9.5403

>NTDB_id=529324 K3B00_RS06380 WP_000121118.1 1293739..1295025(+) (eeP) [Staphylococcus aureus strain HL24830]
MSYLVTIIAFIIVFGVLVTVHEYGHMFFAKRAGIMCPEFAIGMGPKIFSFRKNETLYTIRLLPVGGYVRMAGDGLEEPPV
EPGMNVKIKLNEENEITHIILDDHHKFQQIEAIEVKKCDFKDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRD
RQFAHKKPWPKFLTLFAGPLFNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGLQKGDKIVQIGKYKISEFDDVDK
ALDKVKDNKTTVKFERDGKTKSVELTPKKTERKLTKVSSETKYVLGFQPASEHTLFKPIVFGFKSFLIGSTYIFTAVVGM
LASIFTGGFSFDMLNGPVGIYHNVDSVVKAGIISLIGYTALLSVNLGIMNLIPIPALDGGRILFVIYEAIFRKPVNKKAE
TTIIAIGAIFMVVIMILVTWNDIRRYFL

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=529324 K3B00_RS06380 WP_000121118.1 1293739..1295025(+) (eeP) [Staphylococcus aureus strain HL24830]
GTGAGCTATTTAGTTACAATAATTGCATTTATTATTGTTTTTGGTGTACTAGTAACTGTTCATGAATATGGCCATATGTT
TTTTGCGAAAAGAGCAGGCATTATGTGTCCAGAATTTGCGATCGGTATGGGGCCAAAAATTTTTAGTTTTAGAAAAAATG
AAACACTTTACACTATTAGGTTATTGCCTGTTGGTGGATATGTTCGTATGGCAGGAGATGGCTTAGAAGAGCCACCAGTC
GAGCCCGGTATGAACGTTAAAATTAAACTGAATGAAGAAAATGAAATAACACATATCATATTAGATGATCATCATAAGTT
TCAACAAATTGAAGCGATCGAAGTTAAAAAATGTGATTTTAAGGATGACTTATTCATAGAAGGTATCACTGCTTATGATA
ATGAAAGACATCATTTTAAAATTGCTAGAAAGTCTTTCTTTGTTGAAAATGGTAGCTTAGTTCAAATTGCTCCGAGAGAC
AGACAATTTGCACATAAAAAGCCATGGCCGAAATTTTTAACATTATTTGCGGGACCGTTATTTAACTTTATATTAGCTTT
AGTCCTATTTATTGGTCTTGCATATTATCAAGGTACACCTACGTCTACTGTAGAACAAGTCGCAGATAAGTATCCAGCTC
AACAAGCAGGATTACAAAAAGGTGATAAAATTGTTCAAATTGGCAAATATAAAATATCTGAATTTGATGATGTTGATAAG
GCGTTAGATAAAGTTAAAGATAATAAGACGACTGTTAAATTTGAACGTGATGGTAAAACGAAGTCAGTTGAATTAACACC
TAAAAAGACTGAAAGAAAACTGACTAAAGTAAGTTCAGAGACGAAGTATGTTCTCGGATTCCAACCAGCGAGTGAACATA
CACTTTTTAAACCAATTGTATTCGGATTTAAAAGCTTTTTAATCGGTAGTACTTATATTTTTACAGCTGTAGTAGGTATG
TTGGCTAGTATATTTACGGGCGGATTCTCATTTGATATGTTAAATGGTCCGGTTGGTATTTATCATAACGTCGACTCAGT
TGTTAAAGCGGGTATCATTAGCTTAATTGGTTACACTGCGTTATTAAGTGTAAACTTAGGTATTATGAATTTAATTCCTA
TTCCTGCACTAGACGGTGGTCGTATTTTATTTGTTATATATGAAGCGATTTTCAGAAAACCAGTTAATAAAAAAGCGGAA
ACAACGATTATTGCTATTGGTGCCATTTTCATGGTCGTTATTATGATATTAGTAACGTGGAATGATATTCGACGATATTT
CTTATAA

Domains


Predicted by InterProScan.

(191-265)

(9-413)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.675

100

0.4

  eeP Streptococcus thermophilus LMG 18311

39.12

100

0.395