Detailed information NTG0529285

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: K7G42_RS11600
• Genome accession: NZ_CP082783
• Coordinates: 2211430..2212524 (+)
• Length: 364 a.a.
• NCBI ID: WP_003105355.1
• Uniprot ID: A0ABN0INW8
• Organism: Streptococcus parauberis strain KRS02083
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2206430..2217524

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K7G42_RS11575 (K7G42_11490)	pgsA	2206540..2207082 (-)	543	WP_003105484.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
K7G42_RS11580 (K7G42_11495)	-	2207095..2208072 (-)	978	WP_003103025.1	RodZ family helix-turn-helix domain-containing protein	-
K7G42_RS11585 (K7G42_11500)	yfmH	2208122..2209402 (-)	1281	WP_003103837.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
K7G42_RS11590 (K7G42_11505)	yfmF	2209402..2210646 (-)	1245	WP_003108846.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
K7G42_RS11595 (K7G42_11510)	yaaA	2211023..2211427 (+)	405	WP_003103342.1	S4 domain-containing protein YaaA	-
K7G42_RS11600 (K7G42_11515)	recF	2211430..2212524 (+)	1095	WP_003105355.1	DNA replication/repair protein RecF	Machinery gene
K7G42_RS11605 (K7G42_11520)	guaB	2212712..2214193 (-)	1482	WP_003104758.1	IMP dehydrogenase	-
K7G42_RS11610 (K7G42_11525)	trpS	2214436..2215458 (-)	1023	WP_003107950.1	tryptophan--tRNA ligase	-
K7G42_RS11615 (K7G42_11530)	-	2215854..2216726 (+)	873	WP_003104058.1	YitT family protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 41839.84 Da
• Isoelectric Point: 7.6337

>NTDB_id=529285 K7G42_RS11600 WP_003105355.1 2211430..2212524(+) (recF) [Streptococcus parauberis strain KRS02083]
MWLKELTLNHFRNYNDLNINFSEGLNIFIGNNAQGKTNILEAIYFIALTRSHRTRSDKELIQFSTDRLSIEGKLNRLSGN
ISLEINLSDKGRITKINSLKQAKLSEYIGTMMVVLFAPEDLQLVKGAPSLRRKFIDIDLGQIKPVYLSDLSNYNHILKQR
NAYLKAARTIDFDFLVVLDQQLSYYGSRVIQQRIQFIADLEKEADAHHQAISNELESLQIKYISSIDTSQSQLIQEKFME
QLERNRQRDIFRKNTSIGPHRDDIEFYINNMNANFASQGQHRSLILSIKMAEVSLMKILTGDNPILLLDDVMSELDNTRQ
TKLIETVIQENVQTFITTTSLEHLSQLPKTLKTFHVTSGTIKAD

Nucleotide

• Length: 1095 bp

>NTDB_id=529285 K7G42_RS11600 WP_003105355.1 2211430..2212524(+) (recF) [Streptococcus parauberis strain KRS02083]
ATGTGGTTAAAGGAATTAACACTAAATCACTTTAGAAATTATAATGACTTAAATATAAATTTTTCAGAGGGACTAAACAT
CTTTATAGGAAACAATGCCCAAGGAAAAACGAACATCTTAGAAGCTATCTATTTTATTGCCTTAACTAGAAGTCATCGCA
CAAGAAGTGATAAAGAATTAATCCAGTTTTCAACTGATCGTTTATCTATTGAAGGAAAATTAAATCGCCTCTCAGGTAAT
ATCAGTTTAGAAATTAATTTATCTGATAAAGGTCGAATAACAAAGATTAATTCATTAAAACAAGCAAAACTTTCTGAATA
TATAGGTACAATGATGGTAGTACTCTTTGCTCCTGAAGATTTACAATTAGTTAAAGGCGCTCCTAGTCTTCGAAGAAAGT
TTATTGATATTGATTTAGGTCAAATTAAACCTGTTTATCTATCTGACTTATCGAATTATAACCATATTTTAAAACAAAGA
AACGCATATTTAAAAGCTGCTAGAACAATTGATTTTGACTTTCTAGTAGTTTTGGATCAACAATTATCATATTATGGTAG
CCGTGTTATTCAGCAAAGAATTCAATTCATAGCTGATCTTGAAAAAGAAGCAGATGCTCATCATCAGGCAATATCAAATG
AACTAGAAAGTTTACAAATTAAATATATTTCTAGCATTGATACAAGTCAAAGTCAACTTATTCAAGAAAAATTCATGGAG
CAACTTGAAAGAAATCGTCAACGTGATATTTTTAGAAAGAATACGAGTATTGGCCCACATAGAGATGACATTGAATTTTA
TATAAATAATATGAATGCAAATTTTGCAAGCCAAGGTCAACATCGAAGCTTAATTTTATCCATAAAGATGGCTGAAGTGA
GTTTAATGAAAATCTTGACTGGAGATAATCCAATACTACTGTTAGATGATGTTATGAGTGAATTAGACAATACAAGACAA
ACAAAATTAATTGAGACTGTCATTCAAGAAAATGTTCAAACTTTTATTACTACTACTAGTTTGGAACACCTCTCGCAACT
TCCAAAAACTTTAAAAACTTTTCATGTAACTAGTGGAACCATTAAGGCAGACTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-360)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	61.281	98.626	0.604
recF	Bacillus subtilis subsp. subtilis str. 168	43.935	100	0.448